Transcription Factor
| Accessions: | T044597_1.02 (CISBP 1.02) |
| Names: | EGR3, T044597_1.02; |
| Organisms: | Homo sapiens |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | family:C2H2 ZF |
| Length: | 228 |
| Pfam Domains: | 116-140 C2H2-type zinc finger 116-140 Zinc finger, C2H2 type 133-156 Zinc-finger double domain 146-168 C2H2-type zinc finger 146-168 Zinc finger, C2H2 type 160-184 Zinc-finger double domain 174-196 Zinc finger, C2H2 type 174-194 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MDIGLTNEKPNPELSYSGSFQPAPGNKTVTMIPDYNLYHHPNDMGSIPEHKPFQGMDPIR 60 61 VNPPPITPLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKYPNRPSKTPLHERPHACPA 120 121 EGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFACEFCG 180 181 RKFARSDERKRHAKIHLKQKEKKAEKGGAPSASSAPPVSLAPVVTTCA |
| Interface Residues: | 98, 102, 105, 108, 111, 124, 128, 129, 130, 131, 132, 134, 135, 156, 157, 158, 159, 160, 162, 163, 164, 173, 184, 185, 186, 187, 188, 189, 190, 191, 192, 195 |
| 3D-footprint Homologues: | 8ssq_A, 7w1m_H, 8ssu_A, 5kkq_D, 5ei9_F, 5v3j_F, 6blw_A, 4gnx_Z, 7n5w_A, 6jnm_A, 1tf3_A, 4x9j_A, 2jpa_A, 1g2f_F, 5kl3_A, 1ubd_C, 2kmk_A, 7ysf_A, 6ml4_A, 6u9q_A, 2gli_A, 1f2i_J, 2wbs_A, 1tf6_A, 8h9h_G, 2lt7_A, 6e94_A, 6a57_A, 3uk3_C, 8cuc_F, 7y3l_A, 7txc_E, 1llm_D, 2drp_D, 5k5i_A, 5yel_A, 4m9v_C, 7y3m_I, 8gn3_A, 5yj3_D |
| Binding Motifs: | M3178_1.02 vtGCGTrGGCGk |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.