Transcription Factor

						

			
Accessions: T25150 (AthalianaCistrome v4_May2016)

			
Names: AT5G11190, SHN3, T25150;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: DAP-seq, family:AP2-EREBP
Length: 189
Pfam Domains:      6-55 AP2 domain
Sequence: 
(in bold interface residues)		   1 MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT   60
  61 NFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGV  120
 121 WQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAME  180
 181 MIEELLNWS
Interface Residues: 11, 13, 14, 15, 21, 23, 28, 30, 32, 113, 115, 116, 122, 124
3D-footprint Homologues: 1gcc_A, 5wx9_A, 7et4_D, 7wq5_A
Binding Motifs: M0127 wCCrCCgCCrCCdCCrCCgCc
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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