Transcription Factor
| Accessions: | T157826_1.02 (CISBP 1.02) |
| Names: | HCAG_01476, T157826_1.02; |
| Organisms: | Ajellomyces capsulatus |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Zinc cluster |
| Length: | 881 |
| Pfam Domains: | 151-188 Fungal Zn(2)-Cys(6) binuclear cluster domain 308-502 Fungal specific transcription factor domain |
| Sequence: (in bold interface residues) | 1 MTSFERNGGNTSAPMVSWYWPEVPRLLMTDTSPAKHVLIFSMRAWTSDHLAVNHCLLRHL 60 61 SSIRSPITFLPRKLMHLWSQLHIVMDGVNQPSTKLSDVRSGELQQSGPSGQDSVAHQSEP 120 121 PTQIGNDSSPEPRANGANQSTAWVPRPKRIACIICRKRKLRCDGNKPSCGTCSRLGHDCA 180 181 YDEVRKKSGPKRGYVKLLEARLAQVETLLKSQDSGDVFQKSPVPTDFNPRPPTSGSVANS 240 241 MADVFPSSNPTGNSRTVPLDLFGDLNSTQINLPDDSITSGGDFSWEMIGLGLEEPLPAQD 300 301 VIDELNEIYFQKIHPSMPLLHQPRYYAAMNLSPNMRPPVCLRYVMWALAASVTDKYRTLH 360 361 PHFYQRARKYAELDQMRGLGESMITIAHAQTWILLSSYEFRLMFFPRAWISTGHAMRLCM 420 421 MMGLHRLDGSGPAVKMCLGPARDWTEQEERRRTFWIAFCQDRYASVGTGWPMMMDERDIL 480 481 TNLPASDEAFFNSKMQQTYTLASLTAGENISTLSSLAGLVLIACIFGRNLHHLHRTTPGD 540 541 TDHDLNGGFWRRHRALDNILLSTSLALPSHLRLPEGINDSSVVFLNLCIHSSTICLHQAA 600 601 IFKAEKNDMPSQIAAEGKRRSIVAADQITSIMKMASHIDLTLKSPQMNDSCGALKTIFQE 660 661 HDLQPPENLAVSSSYEQTTAPPVMSSLPNRSKPSVGSVSASGNDNHTHGVNVGSFSLPTD 720 721 KHFVKSMAVEMDLSEASTISDRQYLSSDHPTPGTNQSSSSSISPRIIDQPSPPVQQHHKR 780 781 QQLQRPNPNAYVPDLPPSQFESSLDNNTGTAYANYFTPGNPPPNTAGFENPFAFPAGWNT 840 841 RGTHQPSSASTSAELVDHIPNLDNITWPGGVDPLSWETYQG |
| Interface Residues: | 146, 158, 159, 160, 163, 173, 174, 186, 187, 188, 189, 192, 195, 450, 452 |
| 3D-footprint Homologues: | 6o19_A, 2er8_C, 1hwt_C, 1pyi_A, 3coq_A, 7uik_T, 6gys_C, 1d66_B, 1zme_D, 3g9m_B, 5e69_A, 7prw_B, 4hn5_B, 5emc_A, 5cbx_B, 3g6t_A, 5cbz_E, 1dct_B |
| Binding Motifs: | M1708_1.02 tmcyCCGATcgg |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.