Transcription Factor

Accessions: NFKB1_DBD (HumanTF 1.0)
Names: E3 SUMO-protein ligase MUL1, E3 ubiquitin-protein ligase MUL1, EC 6.3.2.-, Growth inhibition and death E3 ligase, MAPL, Mitochondrial ubiquitin ligase activator of NFKB 1, Mitochondrial-anchored protein ligase, MUL1_HUMAN, NFKB1, Putative NF-kappa-B-activating protein 266, RING finger protein 218
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Uniprot: Q969V5
Notes: Ensembl ID: ENSG00000109320; DNA-binding domain sequence; TF family: NFAT; Clone source: Megaman
Length: 345
Pfam Domains: 24-222 Rel homology domain (RHD)
Sequence:
(in bold interface residues)
1 THTIFNPEVFQPQMALPTADGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKS 60
61 YPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGICTVTAGPKDMVVGFANLG 120
121 ILHVTKKKVFETLEARMTEACIRGYNPGLLVHPDLAYLQAEGGGDRQLGDREKELIRQAA 180
181 LQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAG 240
241 CVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKD 300
301 INITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQK
Interface Residues: 36, 38, 39, 41, 42, 44, 45, 46, 223, 225, 254, 287, 314, 315
3D-footprint Homologues: 1nfk_A, 9bdw_A, 1a3q_A, 1a66_A, 2o61_A, 1gji_A, 7cli_B, 1p7h_L
Binding Motifs: NFKB1_DBD AGGGGAwTCCCCt
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.