Transcription Factor

Accessions: AtMYB4 (AthaMYB 1.0)
Names: AtMYB4, Myb-related protein 4, Transcription repressor MYB4
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9SZP1
Length: 283
Pfam Domains: 14-61 Myb-like DNA-binding domain
17-76 Myb-like DNA-binding domain
67-111 Myb-like DNA-binding domain
70-119 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60
61 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG 120
121 IDPTSHRPIQESSASQDSKPTQLEPVTSNTINISFTSAPKVETFHESISFPGKSEKISML 180
181 TFKEEKDECPVQEKFPDLNLELRISLPDDVDRLQGHGKSTTPRCFKCSLGMINGMECRCG 240
241 RMRCDVVGGSSKGSDMSNGFDFLGLAKKETTSLLGFRSLEMK*
Interface Residues: 14, 49, 51, 52, 54, 55, 58, 59, 60, 67, 82, 101, 102, 103, 105, 106, 109, 110, 111
3D-footprint Homologues: 3osg_A, 1vfc_A, 2kdz_A, 6kks_A, 1mse_C, 3zqc_A, 5eyb_B, 1ign_A
Binding Motifs: AtMYB4_I rymAGTTA
Binding Sites: ACAAGTTA
GTCAGTTA
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.