Transcription Factor

						

			
Accessions: T057804_1.02 (CISBP 1.02)

			
Names: CG7386, T057804_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 662
Pfam Domains:     11-81 Zinc-finger associated domain (zf-AD)  
  223-245 C2H2-type zinc finger
  256-280 C2H2-type zinc finger
  294-314 C2H2-type zinc finger
  307-331 Zinc-finger double domain
  321-343 C2H2-type zinc finger
  321-343 Zinc finger, C2H2 type
  349-371 C2H2-type zinc finger
  365-387 Zinc-finger double domain
  392-416 Zinc-finger double domain
  406-428 C2H2-type zinc finger
  424-445 Zinc-finger double domain
  435-456 C2H2-type zinc finger
  436-454 Zinc-finger of C2H2 type
  532-555 C2H2-type zinc finger
  546-572 Zinc-finger double domain
  561-580 C2H2-type zinc finger
  577-599 Zinc-finger double domain
  589-611 Zinc finger, C2H2 type
  589-611 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MELKYSVQSLCLTCLVHLKHGAGHDLFVVPDLFQKLRACTSFDADQNDGFPRNLCTQCFT   60
  61 KLNDLHDFRELCAESIKRLKEMMTSQRNMPMGVFESIADDSEAPERPEEPASFDPLLNNK  120
 121 LEMIDNEEDVFKLLEKVDKELEEHSRDQSEEHFSSAEHNGLEEEKKESEGFNSDDEQAMG  180
 181 QRRIANDKRKLFRLMSCSICQQKFKKQSKFEEHMKHHNDLLPFQCQEESCRKGFTTAGAL  240
 241 RLHVDYAHSKKEDTVPCTVEGCQLVFSRLRLLTIHLKKVHNQARVIAPRGEQSCKECGVV  300
 301 FRCPVAMKKHMYTHTGEELPYPCTICGKGFYINSALKNHLLRHAGIKNYVCQYCGVRKTT  360
 361 RQEWSKHILIHTQRNQFKCRICDYATHTKRVLESHVKIVHEKIRNFACQYCGKTFGKAYA  420
 421 CKIHEMAHTGEKRCECKVCDKKFLHSESLNNHLKIHEKSVERALETYKQVQVNGDASDTQ  480
 481 VDSHQLLKVYAESVASIPKNPRRVEQVDVALLAGTAVNPTDEIQFVQKEGMYLCPSCSQG  540
 541 FKSIGNMKRHYKSVHEKVKDFECRFCSRRFANSQSVKQHEWIHTGEKPFECKTCGNRFRQ  600
 601 VAALIRHQKVHDEKPAKPLGERNDRKQKVEALRQEIAKVAKKELKDLKNQLALEKQQDTY  660
 661 EK
Interface Residues: 205, 206, 208, 209, 236, 238, 239, 242, 246, 267, 268, 270, 271, 274, 278, 303, 305, 306, 309, 331, 332, 333, 334, 335, 337, 338, 360, 361, 362, 363, 364, 365, 366, 370, 387, 388, 389, 390, 391, 393, 394, 416, 417, 419, 420, 422, 423, 444, 445, 447, 448, 449, 450, 451, 483, 484, 485, 486, 489, 492, 503, 506, 509, 527, 541, 542, 543, 544, 545, 546, 548, 549, 553, 554, 571, 572, 573, 574, 575, 577, 578, 579, 599, 600, 601, 602, 603, 604, 605, 606, 607, 610
3D-footprint Homologues: 1tf3_A, 1tf6_A, 8ssq_A, 8ssu_A, 6a57_A, 1ubd_C, 2gli_A, 7w1m_H, 6e94_A, 7txc_E, 5k5i_A, 5yel_A, 2wbs_A, 5yj3_D, 6ml4_A, 5v3j_F, 8gn3_A, 3uk3_C, 7y3l_A, 7n5w_A, 6jnm_A, 5ei9_F, 2jpa_A, 1g2f_F, 5kl3_A, 2kmk_A, 2drp_D, 6blw_A, 4x9j_A, 5kkq_D, 8h9h_G, 7ysf_A, 2lt7_A, 8cuc_F, 1llm_D, 5k5l_F, 6u9q_A, 1f2i_J, 4m9v_C, 7y3m_I
Binding Motifs: M4878_1.02 GTGAAtGA
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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