Transcription Factor
| Accessions: | T008656_1.02 (CISBP 1.02) |
| Names: | PHF21A, T008656_1.02; |
| Organisms: | Anolis carolinensis |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AT hook |
| Length: | 622 |
| Pfam Domains: | 367-377 AT hook motif 432-476 PHD-finger |
| Sequence: (in bold interface residues) | 1 KRVVEQLRKNLMVKQEQPDSKFQIQPLAQSENKIQTPQPLQQQQQQQTTAPSPNLLGSQK 60 61 TVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSSQKTVLSTDAQNTPVNL 120 121 QTTNKITGPGTEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVA 180 181 QNNIPIAPAPPPPMLAAPQLLQRPVMLTTKFTPTSLPSSQNSIHPVRVVNGQTATIAKTF 240 241 PMAQLTSIVIAAPGTRLAGPQTLQISKPNVEKQTIKPQAETEEKPTEIHTVMPPAPLKPK 300 301 REENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLN 360 361 STMHPGTRKRGRPPKYNTVLGFGALTPTSPLSSHPDSPENEKTETTFTFPATVQPVSLPS 420 421 PSSADGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQDQMLK 480 481 KEEAIPWPGTLAIVHSYIAYKTAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSITKCM 540 541 EMKNTILARQKEMHSSLEKVKQLIRLIQGISLSKPMNSEASSVVISNGMDTTNNANTAAA 600 601 SNPASSPNQSCMVNCNNGSETK |
| Interface Residues: | 517, 521, 524 |
| 3D-footprint Homologues: | 6cg0_A |
| Binding Motifs: | M0124_1.02 mkrawaRh |
| Related annotations: | PaperBLAST |
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