Transcription Factor

						

			
Accessions: T00194 (AthalianaCistrome v4_May2016), Q9C690 (JASPAR 2024)

			
Names: AT1G51140, bHLH122, T00194;, AtbHLH122, Basic helix-loop-helix protein 122, BH122_ARATH, bHLH 122, bHLH transcription factor bHLH122, Transcription factor bHLH122, Transcription factor EN 70
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1, JASPAR 2024 2
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:bHLH
Length: 379
Pfam Domains:   316-361 Helix-loop-helix DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MESEFQQHHFLLHDHQHQRPRNSGLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILS   60
  61 GFLQTTDTSDNVDSFLHHTFNSDGTEKKPPEVKTEDEDAEIPVTATATAMEVVVSGDGEI  120
 121 SVNPEVSIGYVASVSRNKRPREKDDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKSMG  180
 181 GFGGSNVMSTSNTEASSLTPRSKLLPPTSRAMSPISEVDVKPGFSSRLPPRTLSGGFNRS  240
 241 FGNEGSASSKLTALARTQSGGLDQYKTKDEDSASRRPPLAHHMSLPKSLSDIEQLLSDSI  300
 301 PCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDL  360
 361 QEQVKALEESRARCRCSSA
Interface Residues: 315, 316, 318, 319, 322, 323
3D-footprint Homologues: 1am9_A, 5eyo_A, 5gnj_I
Binding Motifs: M0158 ttdkCmACTTGcmw
M0167 dgCmACTTGca
MA1739.1 ttdkCmACTTGcmw
MA1739.2 CmACTTG
			
Publications: Liu W, Tai H, Li S, Gao W, Zhao M, Xie C, Li WX. bHLH122 is important for drought and osmotic stress resistance in Arabidopsis and in the repression of ABA catabolism. New Phytol 201:1192-1204 (2014). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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