Transcription Factor

						

			
Accessions: T057741_1.02 (CISBP 1.02)

			
Names: CG12236, T057741_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 510
Pfam Domains:    23-117 BTB/POZ domain
  450-471 C2H2-type zinc finger
  462-488 Zinc-finger double domain
  478-500 Zinc finger, C2H2 type
  478-497 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MATTQQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEI   60
  61 FKENPHPHPVIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEK  120
 121 EKPQIPVAPLISEHKLIKTIPSTIRAVNEQQQQVSNVAQAQTATQTIEIPAATLLQATNA  180
 181 SQVPSQVVAAAAAAAAAQQLQVQHQQQQHHHVQTTQIQHIQVQSAPPPQQQQQQQQQQQQ  240
 241 QQQQQQQQQQQQSQQQQTTPVQTQHLTITNAVALPAASSVKKRKITFSDDDDNMYTTETV  300
 301 DYAVKDEQTIVKTAEMTFLRGAVKMDIPDYIVGEVDDRLSDGATPQTSQDATTAAAQNVA  360
 361 QYSSEYEILTESEMEEKYQADADNAEIAIEMTRLLGTASGTPGAGSGQVMEDSGGGSATT  420
 421 GPSTTVSVTQVKSDSKASGTNDSPNNKWTECQFCKMVITTVNLWRHIRTQHTPQPPRKCD  480
 481 MCNKNFKNKYSLREHIRISHEQKVAIKTEN
Interface Residues: 458, 459, 460, 461, 462, 463, 464, 465, 466, 469, 487, 488, 489, 490, 491, 492, 493, 494, 495
3D-footprint Homologues: 3uk3_C, 5v3j_F, 2kmk_A, 7w1m_H, 7y3l_A, 6ml4_A, 5k5i_A, 1ubd_C, 8ssq_A, 7txc_E, 5kkq_D, 1llm_D, 8ssu_A, 7eyi_G, 5und_A, 8h9h_G, 7n5w_A, 4m9v_C, 6u9q_A, 2drp_D, 6wmi_A, 2lt7_A, 6e94_A, 7y3m_I, 5k5l_F, 5yel_A, 5ei9_F, 1mey_C, 2i13_A, 1g2f_F, 2gli_A, 1f2i_J, 4x9j_A, 7ysf_A, 8cuc_F
Binding Motifs: M4814_1.02 TGGAAr
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.