footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Transcription Factor

Accessions:	P17535 (JASPAR 2024)
Names:	JUND_HUMAN, Transcription factor AP-1 subunit JunD, Transcription factor JunD
Organisms:	Homo sapiens
Libraries:	JASPAR 2024 ¹ ¹ Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot:	P17535
Length:
Binding Motifs:	MA0491.1 drTGAsTCATs MA0492.1 wrwrATGAyGTMATm MA1141.1 kkrTGAGTCAymv MA1142.1 rrTGActmAt MA1143.1 rTGACgymay MA1144.1 krTGAsTCAy MA1145.1 kkrTkACGTCAycgc MA0491.2 wraTGACTCAThh MA0491.3 aTGACTCAT MA0492.2 rATGAyGTMAT MA1141.2 rTGAGTCAy MA1142.2 rTGActmA MA1143.2 rTGACgyma MA1144.2 rTGAsTCAy MA1145.2 rTkACGTCAy
Binding Sites:	MA0491.1.1 MA0491.1.10 MA0491.1.11 MA0491.1.12 MA0491.1.13 MA0491.1.14 MA0491.1.15 MA0491.1.16 MA0491.1.17 MA0491.1.18 MA0491.1.19 MA0491.1.2 MA0491.1.20 MA0491.1.3 MA0491.1.4 MA0491.1.5 MA0491.1.6 MA0491.1.7 MA0491.1.8 MA0491.1.9 MA0492.1.1 MA0492.1.10 MA0492.1.11 MA0492.1.12 MA0492.1.13 MA0492.1.14 MA0492.1.15 MA0492.1.16 MA0492.1.17 MA0492.1.18 MA0492.1.19 MA0492.1.2 MA0492.1.20 MA0492.1.3 MA0492.1.4 MA0492.1.5 MA0492.1.6 MA0492.1.7 MA0492.1.8 MA0492.1.9 MA0491.2.2 / MA0491.2.3 MA0491.2.15 MA0491.2.20 MA0491.2.8 MA0491.2.10 MA0491.2.11 MA0491.2.4 MA0491.2.13 MA0491.2.5 MA0491.2.6 MA0491.2.3 MA0491.2.9 MA0491.2.10 / MA0491.2.4 MA0491.2.14 / MA0491.2.6 MA0491.2.12 MA0491.2.14 MA0491.2.15 MA0491.2.16 MA0491.2.17 MA0491.2.13 MA0491.2.16 MA0491.2.17 / MA0491.2.7 MA0491.2.1 MA0491.2.11 MA0491.2.12 / MA0491.2.5 MA0491.2.18 MA0491.2.19 MA0491.2.1 / MA0491.2.2 MA0491.2.7 MA0491.2.8 MA0491.2.18 MA0491.2.19 MA0491.2.20 MA0491.2.9 MA0491.3.2 MA0491.3.13 / MA0491.3.5 MA0491.3.14 MA0491.3.1 / MA0491.3.15 MA0491.3.16 MA0491.3.17 / MA0491.3.4 MA0491.3.18 MA0491.3.19 MA0491.3.3 MA0491.3.11 / MA0491.3.12 / MA0491.3.6 / MA0491.3.8 MA0491.3.10 MA0491.3.7 MA0491.3.20 MA0491.3.9 MA0492.2.1 MA0492.2.10 MA0492.2.11 MA0492.2.12 MA0492.2.13 MA0492.2.14 MA0492.2.15 MA0492.2.16 MA0492.2.17 MA0492.2.18 MA0492.2.19 MA0492.2.2 MA0492.2.20 MA0492.2.3 MA0492.2.4 MA0492.2.5 MA0492.2.6 MA0492.2.7 MA0492.2.8 MA0492.2.9
Publications:	Colin L, Vandenhoudt N, de Walque S, Van Driessche B, Bergamaschi A, Martinelli V, Cherrier T, Vanhulle C, Guiguen A, David A, Burny A, Herbein G, Pancino G, Rohr O, Van Lint C. The AP-1 binding sites located in the pol gene intragenic regulatory region of HIV-1 are important for viral replication. PloS one 6:e19084 (2011). [Pubmed] Shaulian E, Karin M. AP-1 as a regulator of cell life and death. Nat Cell Biol : (2002). [Pubmed]
Related annotations:	PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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