Transcription Factor
| Accessions: | T161747_1.02 (CISBP 1.02) |
| Names: | NCU02576, T161747_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Zinc cluster |
| Length: | 894 |
| Pfam Domains: | 54-87 Fungal Zn(2)-Cys(6) binuclear cluster domain 293-480 Fungal specific transcription factor domain |
| Sequence: (in bold interface residues) | 1 MSNDPSVRRLLPQTSQMGAFTFAPPAYQQPPRETQKNYVFVDEHNRHKRLKVMRACEGCR 60 61 RRKIKCDAATTNTWPCSACIRLKLHCVRPNGFDGAAEPQVYEPPRAQFDSSPVPESYHQQ 120 121 QLALTDHQQLLTHAQAPKATPIYPPQTSFQDTAALYHTVPYTQPQAVPQNLQYAAVHSAY 180 181 ATPDSFPTPPSMHQVPQVSQLPQISQHPSSPEDFQSEYAQQDLADLLGSLKVNEAGTAPY 240 241 LNSKMRSADDEEPSVEETEEDQFTKNLPPLTAGKIRIPPALMPSEDLCLHYFDLYFTHTH 300 301 PYVPVLDKNQFYHQWHNNREAISPLILEAIFAIANRLADDAAQGQQWLYLATRHADSFLD 360 361 VPRLSTLQASLILLKAREQAPKKGYYYRSWMSIVQCVTMAKDLGLDEHYADHQAGRSCGL 420 421 SPAECQLRDRIWQTIFIVEIMIGTPQGKTDLAVEEETVNFEVPRPLPNGDTSEYHVSRNF 480 481 VYFSRVVRNVCRMSRVYSRLKRNKEWGIDPEFVQIRPAMDAWLTDLPHDLQLDFPVDGSP 540 541 PWLPSSFVGNMHSYYHLSIILFYRPQLAHMTPTGTGGQWKQHMLVSYRAAKMLCRLQEGI 600 601 INQFGIAGLQCMQRGINFTLYAVLACIVLHLVALTSPDPALNAESREYFTRHMRVLEKCM 660 661 GAWPMPDMQRQIDSVREAFSQDIRKPFVLKPSFPYGSPSSTSHPSPPGPSYRSDMSRTSS 720 721 IDHQLDTHVQHSHVSYTTHPLSPPISIGPMDSKSDSHDLQSLAMMSSGHGTQASSMAQTM 780 781 PLTDAPAWNPSRIFDQWNAQFGNPQVQHPSQLTNHASPLSLPSSGASETSLQDLQAAQAQ 840 841 LSPVSQQMPQYPTNPVQTFVTPAMWQESVASVYEGGLKRSWGDYDGHMPVKRNR |
| Interface Residues: | 49, 50, 51, 60, 62, 63, 64, 65, 81, 82, 88 |
| 3D-footprint Homologues: | 1f5e_P, 6o19_A, 1pyi_A, 2er8_C, 1hwt_C, 6gys_C, 1zme_D |
| Binding Motifs: | M1729_1.02 cyCCGrks |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.