Transcription Factor

						

			
Accessions: T149659_1.02 (CISBP 1.02)

			
Names: T149659_1.02;, Tbx4
Organisms: Mus musculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:T-box
Length: 552
Pfam Domains:    74-255 T-box
Sequence: 
(in bold interface residues)		   1 MLQDKGLSESEEAFRAPGPALGEASNTSTTNAPEPALATPGLSGAALSSPPGQGADVAAA   60
  61 AAAAAEQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYIL  120
 121 LIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTN  180
 181 NHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKI  240
 241 TQLKIENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMRQRLVSSQLSAKPDVSPLHS  300
 301 AHQALQHYQYENGAHMQFAAAEPQDLPLNTFPTQRDSSLFYHCLKRRDSARHLDLPCKRS  360
 361 YLETPSSVGDDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSSSGPEIAGVSAVDDLPPP  420
 421 PLSCNMWTSVSPYTSYSVQTMETVPYQPFPAHFTATTVMPRLPTIAAQSAQPPGNAHFSV  480
 481 YNQLSQSQVRERGPSASFPRERGLPGMCERKPPSPHLNTANEFLYSQSFSLTRESSLQYH  540
 541 SGMGTVENWTDG
Interface Residues: 99, 233, 234, 250, 253, 254
3D-footprint Homologues: 6f59_B, 2x6v_A, 4a04_B, 1h6f_B, 5flv_I, 1xbr_B
Binding Motifs: M1627_1.02 AGGTGTkA
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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