Transcription Factor

Accessions: RR-Myb2 (EEADannot 2025-01-07)
Names: Mp2g13020.1
Organisms: Marchantia polymorpha
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Notes: family:Myb-like
Length: 188
Pfam Domains: 103-147 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 SWTSEQDKLFENALAVYDESPNRWDNVASMVPGKDAADVMKHYELLTEDVTSIDAGRVAL 60
61 PSYILDSSVSKNKAWSGGTSGTVGGLERKSSSKADQERRKGIPWTEEEHRSFLLGLAKFG 120
121 KGDWRSISRNFVISRTPTQVASHAQKYFIRLNSINKDKRRSSIHDITSVNSAGVEVMQGS 180
181 PGPITGQS
Interface Residues: 136, 137, 138, 139, 141, 142, 145, 146, 149, 150
3D-footprint Homologues: 2kdz_A, 8xas_E, 1vfc_A, 7xur_A
Binding Motifs: EEAD0148 wwdwrGATAAgrw
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.