Transcription Factor

Accessions: NFYA1 (EEADannot 2026-03-04)
Names: ZmCA2P11;NFYA1;Zm00001eb005690_P001
Organisms: Zea mays
Libraries: EEADannot 2026-03-04 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Notes: family:Heteromeric CCAAT-binding factors NF-YA
Length: 220
Pfam Domains: 112-168 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
Sequence:
(in bold interface residues)
1 MRQNGAVMIQFGHQMPDYDSPATQSTSETSHQEASGMSEGSLNEHNNDHSGNLDGYSKSD 60
61 ENKMMSALSLGNPETAYAHNPKPDRTQSFMHPQLVGMVPSSRVPLPIEPAAEEPIYVNAK 120
121 QYHAILRRRQLRAKLEAENKLVKSRKPYLHESRHLHAMKRARGTGGRFLNTKQQPESPGS 180
181 GGSSDAQRVPATASGGLFTKHEHSLPPGGRHHYHARGGGE
Interface Residues: 153, 156, 160, 162, 167, 168
3D-footprint Homologues: 4awl_A, 4g92_A, 6r2v_A
Binding Motifs: EEAD0493 cyGATTGGTyrrykt
EEAD0494 cyGATTGGtyrrt
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.