Transcription Factor
| Accessions: | SNAI2_MOUSE (HOCOMOCO 10) |
| Names: | Neural crest transcription factor Slug, Protein snail homolog 2, SNAI2_MOUSE, Zinc finger protein SNAI2 |
| Organisms: | Mus musculus |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Uniprot: | P97469 |
| Length: | 269 |
| Pfam Domains: | 129-153 C2H2-type zinc finger 129-151 Zinc finger, C2H2 type 129-150 C2H2-type zinc finger 160-182 C2H2-type zinc finger 160-182 Zinc finger, C2H2 type 160-182 C2H2-type zinc finger 174-197 Zinc-finger double domain 187-208 Zinc finger, C2H2 type 187-208 C2H2-type zinc finger 188-204 C2H2-type zinc finger 201-224 Zinc-finger double domain 214-236 C2H2-type zinc finger 214-234 Zinc-finger of C2H2 type 214-236 C2H2-type zinc finger 214-236 Zinc finger, C2H2 type 228-253 Zinc-finger double domain 242-263 Zinc finger, C2H2 type 242-262 C2H2-type zinc finger 242-257 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MPRSFLVKKHFNASKKPNYSELDTHTVIISPYLYESYPIPVIPKPEILTSGAYSPITVWT 60 61 SSAAPLHSPLPSGLSPLTGYSSSLGRVSPPPSSDTSSKDHSGSESPISDEEERLQPKLSD 120 121 PHAIEAEKFQCNLCNKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCDKEYVSLGALKMHIR 180 181 THTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVK 240 241 KYQCKNCSKTFSRMSLLHKHEESGCCVAH |
| Interface Residues: | 139, 140, 142, 143, 146, 150, 170, 171, 172, 173, 174, 176, 177, 179, 180, 183, 196, 197, 198, 199, 200, 202, 203, 204, 224, 225, 226, 227, 228, 229, 230, 231, 232, 235, 252, 253, 254, 255, 256, 258, 259 |
| 3D-footprint Homologues: | 7w1m_H, 5kkq_D, 5yel_A, 6wmi_A, 8ssq_A, 8ssu_A, 2i13_A, 1ubd_C, 7n5w_A, 6jnm_A, 6ml4_A, 4x9j_A, 6blw_A, 5ei9_F, 5kl3_A, 5und_A, 1g2f_F, 8h9h_G, 7eyi_G, 6e94_A, 7ysf_A, 2gli_A, 6a57_A, 2jpa_A, 7y3l_A, 3uk3_C, 1tf3_A, 8cuc_F, 1tf6_A, 5v3j_F, 1llm_D, 2wbs_A, 6u9q_A, 1mey_C, 7txc_E, 1f2i_J, 5k5i_A, 2kmk_A, 4m9v_C, 7y3m_I, 2lt7_A, 8gn3_A, 2drp_D, 5yj3_D, 5k5l_F |
| Binding Motifs: | SNAI2_MOUSE.H10MO.C|M01340 yCAGGTG |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.