Transcription Factor

						

			
Accessions: T08031 (AthalianaCistrome v4_May2016)

			
Names: ASHR1, AT2G17900, T08031;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: DAP-seq
Length: 480
Pfam Domains:    22-247 SET domain
    56-93 MYND finger
Sequence: 
(in bold interface residues)		   1 MADLQRFLQDRCLGVSNLPQKGRSLFTARDFRPGEVILSQKPYICVPNNTSSESRCDGCF   60
  61 KTNNLKKCSACQVVWYCGSSCQKSEWKLHRDECKALTRLEKEKRKFVTPTIRLMVRLYIK  120
 121 RNLQNEKVLPITTTDNYSLVEALVSHMSEIDEKQMLLYAQMANLVNLILQFPSVDLREIA  180
 181 ENFSKFSCNAHSICDSELRPQGIGLFPLVSIINHSCSPNAVLVFEEQMAVVRAMDNISKD  240
 241 SEITISYIETAGSTLTRQKSLKEQYLFHCQCARCSNFGKPHDIEESAILEGYRCANEKCT  300
 301 GFLLRDPEEKGFVCQKCLLLRSKEEVKKLASDLKTVSEKAPTSPSAEDKQAAIELYKTIE  360
 361 KLQVKLYHSFSIPLMRTREKLLKMLMDVEIWREALNYCRLIVPVYQRVYPATHPLIGLQF  420
 421 YTQGKLEWLLGETKEAVSSLIKAFDILRISHGISTPFMKELSAKLEEARAEASYKQLALH  480
Interface Residues: 238
3D-footprint Homologues: 8emh_J
Binding Motifs: M0716 tyatcwTCACCAtca
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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