Transcription Factor
| Accessions: | T084529_1.02 (CISBP 1.02) |
| Names: | gtaG, T084529_1.02; |
| Organisms: | Dictyostelium discoideum |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:GATA |
| Length: | 1006 |
| Pfam Domains: | 842-875 GATA zinc finger |
| Sequence: (in bold interface residues) | 1 MKLYSIDFPLNESNNIFPNSSENININNNNINNSNPNNFINSNTDSELYGNYKPSSSNNF 60 61 INNHHNNQSSDIHSISQSTPNLSTLISSSSNNNNNNNNNNSPNYSMNSSSDQAPNLLNMD 120 121 SKLRWNQPFQNQQQQQPTSEVSTNSANTSSENTTCNNSPVSSSTNYIPNNSTSNVVLNSS 180 181 IPTTSPNVLSAPNKKRQRDDIDCGNNNNINNNNINNNINNNNNNNNNNNNNNNNNNNNNN 240 241 NGYIDPFYLRDDKDFNNNNNVQLDNTNISQFNDSKELNIKIKKDNNNNNINNINNINNNN 300 301 NINNNINNNKNLQPQQIQQPQQPQQIQQIQQIQQIQQIQQTQPQQQQQQTQQQPQQQPQQ 360 361 LMSGNLKLPSIHHLEFEVEKNAKKDDSTNTNNNNNNNNNNNNNNNNNNNNIQQANVNTSP 420 421 ISTSTTPNNNNNNQIQNQPQQIPQQQAQQQAQQQAQQKKRKTKPSKYSITPSISLTPTTV 480 481 TSSSSTNSSGSIGASPLSTSTNIPYSVTNNLSSNNLHSYMNPMGQDYSTSGMLSTTNPYT 540 541 HHSPNTSSTVSSSVTSPLINQYGTNPTLTNNHSFYGSLASNQNTGASDGNNNNNNNNNNN 600 601 NGGSGYFQSPVILSPFQKSSNPLNNNHNSNNVYNSSNSHNDINDYISLNSSSNNSYYNSN 660 661 SGSGMTTPQSLGHSPSHNDYNSNNNNNNNNNNNSNNNNSNNSNSNNLTNKYDSNSSLSLL 720 721 SSIGDNNNNNNNNNNNNNKSHSSSYYSSMSNNSNPSSSSSSSSSSSSSSSTLSSLNNNNK 780 781 LSSNNGHIKYEPTSSSNYHDQMSQSHIYQNNFTYYDQSFPHPPVKKTHRRRPANIDKSTL 840 841 YCHNCGTKNTPEWRRGPSGPATLCNACGLAYAKKQREEETNLHKLLLHSNSYSYHRGNML 900 901 ESYVTPSLLPLFNTAANVPYLNTPNNASSSSSSSSSSSSSSSSSSSTSSYSSSSYNIPNT 960 961 NTQYNTTSATSSFKPLTFSSLKTPENTRNTLNTNNNKINYSLNGSI |
| Interface Residues: | 851, 852, 854, 865, 869 |
| 3D-footprint Homologues: | 3vd6_C, 1gat_A, 4hc9_A, 3dfx_B, 4gat_A |
| Binding Motifs: | M0774_1.02 ywryAGATck |
| Related annotations: | PaperBLAST |
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