Transcription Factor

						

			
Accessions: T078939_1.02 (CISBP 1.02)

			
Names: Gm4881, T078939_1.02;
Organisms: Mus musculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Ets
Length: 458
Pfam Domains:   147-228 Ets-domain
Sequence: 
(in bold interface residues)		   1 MAREIRVDALGARVRERVAATAAGGGRASASRDAARSPVGSPSWRPHPAIRRSPLTLFSS   60
  61 PPPGPRPPDCAVQGLPDPILSVSVFAGLRTSCVPRPGVSFPRTPRGHGCGIRTLNTSPRT  120
 121 GADAQGAERFAFPDWAYKPESSPGSRQIQLWHFILELLQKEEYQGVIAWQGDYGEFVIKD  180
 181 PDEVARLWGIRKCKPHMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFSKVVLVNYPLL  240
 241 DVAAAATGSPLLLTPGPFAGAPGPDAPPLTPETLQNLFSAPRLGEPGARTPLFTPETDKL  300
 301 RLDSPFPFLGSGATGYSKPPSLLGPYGRAFPEYPWNFNPYLTGPFPKLPPSLYPPHFYPN  360
 361 PLGSLGHLSAAGAGGGPMAAPLLAATGEGLGPERPSGLAVAPRLALPGAGGPEATLAGKE  420
 421 DSDSELEVTDVSGCSSDSEGDEGPVSPKTKSGKGGNGS
Interface Residues: 145, 200, 201, 203, 204, 205, 207, 208, 222
3D-footprint Homologues: 3zp5_A, 7jsa_J, 3jtg_A, 1dux_F, 8ee9_F, 4mhg_A, 8smh_F, 4uno_A, 2stt_A, 8smj_F, 1bc8_C, 4lg0_B, 1yo5_C, 4iri_A, 1awc_A, 4l18_B
Binding Motifs: M0714_1.02 aacmGGAwry
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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