Transcription Factor
| Accessions: | T161791_1.02 (CISBP 1.02) |
| Names: | NCU06990, T161791_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Zinc cluster |
| Length: | 1056 |
| Pfam Domains: | 198-232 Fungal Zn(2)-Cys(6) binuclear cluster domain 296-599 Fungal specific transcription factor domain |
| Sequence: (in bold interface residues) | 1 MLIRLLLSHTTIGIQLLSSQARYRPSRVCSCIRSLPPAAALTGVCVVESASRTACLLAEL 60 61 ASQLRIQSILSPADPPDADETSATNSTPTGSTPNRKFNDAFAAPVSGEPPSVLPAGSVIA 120 121 PRIYTNDRFPNSRQPLPQSSPLATGGGGLRRHGQTPDNVNKVLMVSATMRPTPESPASPG 180 181 LPDLKRGAKRTPLRSSIACQRCRKSKIKCNNTGGDAPCDTCIRNGKQCIYPDVAPAPPKR 240 241 TEPPTGVKSEQGSERKRPRRLDDIAKLESAVPPAAFAEEVLTAPYLTESVWSEIFDLYKL 300 301 HFATELPFLHLATLKEKMGNRFRAKQSDTSPEINLVLLGVLTLTVRFNPTLVSYVTTLRT 360 361 ASTVSSGPKSRQLGISSDATTASEFYADVLTKALGGLRASMTMASVERVQAFLMLGLYEW 420 421 GQARPKVGGMAAWMYVGMAIRMAQALGLGDGDKEDSKTFKSRPLDTLRLSMSKSQLIIAK 480 481 EIRRRTMFSCLILDRLLGCGKGRASTVRSEDLRIQLPCSEMSFDLSEDVYTGFLNPTAQE 540 541 MARGPISDSADSVLSRFIRLVDIWGEISKWSFAGGRFTEQHAPWKRETTFYQLRMKLETF 600 601 YSELPERFCWSRSNYYKHENHHASSVYVSLHMLGAVCKIMLHREYIPFIAIRCKKPVGPL 660 661 DEPTFAEGDEPTGFWNESAEEIFRAAKDIVDLIDISQQKLPMSTLVLFAVWTAAFVGIYA 720 721 VYFPHIDVERHMLLPPDEDSGVELEEIKKGPTGLTYKTLQQMGKWLKMADTYVQYFHDMV 780 781 RYYDTVKKDYEAAAKAADGPGGEAKINIRLLGGGLEEWKYQGLKVVNNGEILAVDDDRHS 840 841 ISRDSTLEPASSRHDGHHTDHHTKTPRSTSLSFTPINTTTHHHQHPSLDSPADTTQTPDG 900 901 ENISWHHPPYQRPVTGGMLSSSSQHQSPSQSSFTALSPHLATVKQVLGPPPPPAAAVSGS 960 961 GAAASISTLPNIPVYNSSSEVMQYIQENQSIPWNQLPGGVDHFAHGTDDFCFDETGNGFW 1020 1021 GSMPVVMGASTAAHGYVPQPIVGVSGQQGTGWSGLM |
| Interface Residues: | 192, 193, 194, 203, 205, 206, 207, 208, 223, 224, 243 |
| 3D-footprint Homologues: | 1f5e_P, 6o19_A, 1pyi_A, 2er8_C, 1hwt_C, 3coq_A, 1d66_B, 1zme_D, 7uik_T |
| Binding Motifs: | M1755_1.02 twsCCGad |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.