Transcription Factor
| Accessions: | AuxinResponseFactor35 (EEADannot 2023-12-22) |
| Names: | ARF35, GRMZM2G317900 |
| Organisms: | Zea mays |
| Libraries: | EEADannot 2023-12-22 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:ARF |
| Length: | 1069 |
| Pfam Domains: | 148-249 B3 DNA binding domain 274-357 Auxin response factor 936-1024 AUX/IAA family |
| Sequence: (in bold interface residues) | 1 MIKQQQQQAPPAPAPAAAPPPSACEGEKKAPPINSELWHACAGPLVSLPPAGSLVVYFPQ 60 61 GHSEQVAASMQKDVDGHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLLPVTSVRI 120 121 SVLLLYGKEALQLSELALKQPRPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFS 180 181 MQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVIFVRDEKQ 240 241 QLLLGTRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVVP 300 301 FAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNIQVGW 360 361 DESAAGERRNRVSIWEIEPVAAPFFICPPPFFGSKRPRQLGMLWDVIPQAILLKMLDDES 420 421 SEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNMQQNSFANSAMQSEYLRS 480 481 LSNPNMQNLGVADLSRQLNLQNQILQQNSIQFSSPKLPQQMQLANELSKASLPLNQIGVG 540 541 TKPQEQTQDPNNLQRQQQSMNQLLPLSQSQTNLVQAQQQQSLLSQPAVTLAQLPLIQEQQ 600 601 KLIIDMQQQLSNSQPLSQQQTMPQQSIQVPSRATPPPTTTVQQESQQKLPQKHVGFTDTS 660 661 HTTIPPTTSVNTISVVGSPLMATGATHSVVTDEIPSCSTSPSTANGNHIVQPVLGRNQLC 720 721 SMINYEKVPQSTPMSIPSSLEAVTATPRSIKELPKLNSNVKQSVMASKLPNAGHVAQNLT 780 781 NNAPPTDYPETASSATSVWLSQADGLLHHSFPMSNFNQQQQMFKAAAPETDIQGADPSNN 840 841 TLFGINGDGQLGFPMGADDFLSNGIDASKYQGHISTDIDGNYRISKDGQQEISSSMVSQS 900 901 FGASDMAFNSIDSGMNDGGFVNRTSWPPAPPLKRMRTFTKVYKRGAVGRSIDISQFSGYD 960 961 ELKHALARMFSMEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVKCIRILSPQE 1020 1021 VQQISLDGDLGNNILPNQACSSSDGGNAWRARCDQNSGNPSTGSYDQFE |
| Interface Residues: | 153, 155, 160, 161, 162, 164, 205, 206, 207, 208, 210, 211 |
| 3D-footprint Homologues: | 6j9b_A, 6sdg_B, 6ycq_A, 6fas_B, 7et6_A |
| Binding Motifs: | EEAD0038 TGTCGG |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.