Transcription Factor

Accessions: T074988_1.02 (CISBP 1.02)
Names: T074988_1.02;, WUBG_11979T0
Organisms: Wuchereria bancrofti
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:DM
Length: 360
Pfam Domains: 44-90 DM DNA binding domain
Sequence:
(in bold interface residues)
1 MGFDLTQLGYCSISQIQQTNFSSLPPVRCAENIQQLDSAPISKRIPNCQKCGQHGRKSRL 60
61 KGHKRVCPYRDCNCAKCQVVSERQKLMADQIKIRRRQRKDTLLNITRENITATLNAAAAV 120
121 AASGPLPYFHNFNALLYKQLQQNMRHPAVSFLPGQPPSTENILETGPFNNTSGTLTSYLA 180
181 GSAAAAAAATSLKLGQSSQQRPSPSALPHLQFLFQPQVTTPTTTTTSTAAENDLPALSVT 240
241 PPCTHSDGNTNTIVATNPPIAVPVPINPTSVTGIAPNLTAQSALSRTLQQQQQQQLCGIG 300
301 MPHSQQQLLPGPIRNACTGTEIFKSITNISNLRMSVIFFPNNFIFSFVFSWRSYGVFGFT 360
Interface Residues: 44, 83, 87, 90, 91, 94, 95
3D-footprint Homologues: 4yj0_C
Binding Motifs: M0621_1.02 ATGTwTCA
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.