Transcription Factor
| Accessions: | H3H241 (JASPAR 2024) |
| Names: | H3H241_PHYRM |
| Organisms: | Phytophthora ramorum |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | H3H241 |
| Length: | 634 |
| Pfam Domains: | 59-81 C2H2-type zinc finger 75-99 Zinc-finger double domain 89-111 C2H2-type zinc finger 89-111 Zinc finger, C2H2 type 105-129 Zinc-finger double domain 117-141 C2H2-type zinc finger 117-141 Zinc finger, C2H2 type 134-159 Zinc-finger double domain 147-171 C2H2-type zinc finger 147-171 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MAPFALNAKVDAMSLTDPESLSSTAFLPSVAKPTDNSTVSASQAESECLGLKKEDKKVFR 60 61 CTFPGCGREFQLKGNLKRHANIHNGDKKFACKFCGKRFLRKADMEVHYRVHTGEKPYRCK 120 121 YEDCGKCFARRSDLLSHERTHTGRKPFACAFPNCDRSFARKFDLHKHQRLHEEQADASGK 180 181 GKTKKRKLSPRISTSPPTKNDSGDESCDCPSDVTAPFAVSHTVADAALNADVLLPEPLAM 240 241 KTPVPLASTCATGRRKMSATAACLDAPRPMRYELKCPENHIHSPPACFAALSSLDAFLLS 300 301 QETLDLTRPLTLDAFPAHRPSTSVASSCCPAHLELRPPPPEDNAALTGSAIFNGSDGMMD 360 361 QLFSAFPATSPPNSTTLVPKDASGSYPSMASDATSISGLQMMPANSALPNTASMDQTLAE 420 421 PSLAFIAQDGNGSTLAPVSLLSSSATPFDGSAPNAQLSLPASAATPGNFGSAGSSSDFIN 480 481 MGSGVSAAAAGLNKSAAEKACLSTPASSLLDYSRHNRSCGHLSIQHGNHRDYVVQNHLLC 540 541 QDSVTRLGALKRIPPNPKAVAKATATQPVKCSSPKDTHRPGCGHLPVRHKDHIDYVVEDN 600 601 LICQQASWLEDDNLELLGDDFWDFYGAIDAFPTN |
| Interface Residues: | 45, 47, 48, 71, 72, 73, 74, 75, 77, 78, 80, 81, 84, 99, 100, 101, 102, 103, 106, 107, 109, 112, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 159, 160, 161, 162, 163, 165, 166, 169 |
| 3D-footprint Homologues: | 2i13_A, 7n5w_A, 5kl3_A, 2drp_D, 6wmi_A, 5k5i_A, 2kmk_A, 8ssq_A, 7w1m_H, 5und_A, 2gli_A, 8ssu_A, 6ml4_A, 5v3j_F, 8gn3_A, 6blw_A, 5ei9_F, 7eyi_G, 8h9h_G, 7ysf_A, 2lt7_A, 1tf6_A, 5kkq_D, 2jpa_A, 1ubd_C, 3uk3_C, 1tf3_A, 6jnm_A, 8cuc_F, 7y3l_A, 1mey_C, 7txc_E, 5yj3_D, 1g2f_F, 5k5l_F, 4x9j_A, 6u9q_A, 5yel_A, 4m9v_C, 6e94_A, 7y3m_I, 6a57_A, 1f2i_J, 1llm_D, 2wbs_A |
| Binding Motifs: | UN0304.1 cgcCktCGGA |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.