Transcription Factor

						

			
Accessions: Q9HBE1 (JASPAR 2024)

			
Names: BTB/POZ domain zinc finger transcription factor, PATZ1_HUMAN, POZ-, AT hook-, and zinc finger-containing protein 1, Protein kinase A RI subunit alpha-associated protein, Zinc finger and BTB domain-containing protein 19, Zinc finger protein 278, Zinc finger sarcoma gene protein
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q9HBE1
Length: 687
Pfam Domains:    30-159 BTB/POZ domain
  293-314 C2H2-type zinc finger
  356-377 C2H2-type zinc finger
  357-377 Zinc finger, C2H2 type
  369-394 Zinc-finger double domain
  383-405 Zinc finger, C2H2 type
  383-405 C2H2-type zinc finger
  398-423 Zinc-finger double domain
  413-436 Zinc finger, C2H2 type
  413-436 C2H2-type zinc finger
  427-453 Zinc-finger double domain
  442-464 C2H2-type zinc finger
  496-514 Zinc-finger of C2H2 type
  497-517 Zinc finger, C2H2 type
  497-518 C2H2-type zinc finger
  605-628 C2H2-type zinc finger
  605-628 Zinc finger, C2H2 type
Sequence: 
(in bold interface residues)		   1 MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLA   60
  61 ACSEYFESVFSAQLGDGGAADGGPADVGGATAAPGGGAGGSRELEMHTISSKVFGDILDF  120
 121 AYTSRIVVRLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGT  180
 181 SDLGFPLDMTNGAALAANSNGIAGSMQPEEEAARAAGAAIAGQASLPVLPGVDRLPMVAG  240
 241 PLSPQLLTSPFPSVASSAPPLTGKRGRGRPRKANLLDSMFGSPGGLREAGILPCGLCGKV  300
 301 FTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEIC  360
 361 GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK  420
 421 GFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKYLRAA  480
 481 YMADHLKKHSEGPSNFCSICNRGFSSASYLKVHVKTHHGVPLPQVSRHQEPILNGGAAFH  540
 541 CARTYGNKEGQKCSHQDPIESSDSYGDLSDASDLKTPEKQSANGSFSCDMAVPKNKMESD  600
 601 GEKKYPCPECGSFFRSKSYLNKHIQKVHVRALGGPLGDLGPALGSPFSPQQNMSLLESFG  660
 661 FQIVQSAFASSLVDPEVDQQPMGPEGK
Interface Residues: 306, 330, 332, 333, 348, 351, 352, 365, 366, 367, 368, 369, 371, 372, 373, 393, 394, 395, 396, 397, 398, 399, 400, 401, 403, 404, 416, 420, 421, 423, 424, 425, 426, 427, 428, 429, 430, 434, 452, 453, 454, 455, 456, 458, 459, 478, 479, 480, 481, 484, 505, 506, 508, 509, 512, 534, 535, 536, 537, 539, 540, 542, 565, 566, 567, 570, 575, 588, 591, 592, 594, 598, 615, 616, 617, 618, 619, 622, 649
3D-footprint Homologues: 5yel_A, 1yuj_A, 7y3l_A, 7n5w_A, 3uk3_C, 6jnm_A, 8cuc_F, 6ml4_A, 2jpa_A, 8gn3_A, 6blw_A, 5kkq_D, 6u9q_A, 5ei9_F, 2kmk_A, 7txc_E, 5kl3_A, 2gli_A, 6wmi_A, 5k5i_A, 1ubd_C, 7w1m_H, 5und_A, 1mey_C, 8ssu_A, 8h9h_G, 4m9v_C, 7eyi_G, 1tf3_A, 7y3m_I, 1tf6_A, 6e94_A, 7ysf_A, 2lt7_A, 8ssq_A, 2i13_A, 6a57_A, 1f2i_J, 4x9j_A, 2drp_D, 1g2f_F, 5yj3_D, 2wbs_A, 3gox_A, 5v3j_F, 1llm_D, 5k5l_F
Binding Motifs: MA1961.1 ssGGGGmGGGGs
MA1961.2 sGGGGmGGGGs
			
Publications: Ow JR, Ma H, Jean A, Goh Z, Lee YH, Chong YM, Soong R, Fu XY, Yang H, Wu Q. Patz1 regulates embryonic stem cell identity. Stem Cells Dev 23:1062-73 (2014). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.