Transcription Factor

						

			
Accessions: T078277_1.02 (CISBP 1.02)

			
Names: Etv4, T078277_1.02;
Organisms: Mus musculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Ets
Length: 480
Pfam Domains:     7-335 PEA3 subfamily ETS-domain transcription factor N terminal domain
  337-418 Ets-domain
Sequence: 
(in bold interface residues)		   1 MERRMKGGYLDQRVPYTFCSKSPGNGSLGEALMVPQGKLMDPGSLPPSDSEDLFQDLSHF   60
  61 QETWLAEAQVPDSDEQFVPDFHSENLAFHSPTTRIKKEPQSPRTDPALSCSRKPPLPYHH  120
 121 GEQCLYSRQIAIKSPAPGAPGQSPLQPFSRAEQQQSLLRASSSSQSHPGHGYLGEHSSVF  180
 181 QQPVDMCHSFTSPQGGGREPLPAPYQHQLSEPCPPYPQQNFKQEYHDPLYEQAGQPASSQ  240
 241 GGVSGHRYPGAGVVIKQERTDFAYDSDVPGCASMYLHPEGFSGPSPGDGVMGYGYEKSLR  300
 301 PFPDDVCIVPEKFEGDIKQEGIGAFREGPPYQRRGALQLWQFLVALLDDPTNAHFIAWTG  360
 361 RGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEP  420
 421 EALFSLAFPDNQRPALKAEFDRPVSEEDTVPLSHLDESPAYLPELTGPAPPFGHRGGYSY  480
Interface Residues: 100, 102, 103, 106, 389, 390, 392, 393, 394, 396, 397, 411
3D-footprint Homologues: 7u32_A, 7jsa_J, 3jtg_A, 1dux_F, 3zp5_A, 4mhg_A, 8smh_F, 4uno_A, 2stt_A, 8smj_F, 4lg0_B, 1yo5_C, 4iri_A, 1awc_A, 4l18_B, 1bc8_C
Binding Motifs: M0700_1.02 rrcCGGAwry
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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