Transcription Factor

						

			
Accessions: T119749_1.02 (CISBP 1.02)

			
Names: LOC_Os02g22020, T119749_1.02;
Organisms: Oryza sativa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Myb/SANT
Length: 412
Pfam Domains:   237-288 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MEVDHADRDGARRRCREYLLALEEERRKIQVFQRELPLCFDLVTQTIEGMRSQMDAAGSE   60
  61 ETVSDQGPPPVLEEFIPLKPSLSLSSSEEESTHADAAKSGKKEEAETSERHSSPPPPPPE  120
 121 AKKVTPDWLQSVQLWSQEEPQQPSSPSPTPTKDLPCKPVALNARKAGGAFQPFEKEKRAE  180
 181 LPASSTTAAASSTVVGDSGDKPTDDDTEKHMETDKDNDKDAKDKDKEGQSQPHRKPRRCW  240
 241 APELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSSTGQS  300
 301 SAAAGVPAPPAPQFVVVGSIWVPPPEYAAAAAAQQHVQLAAAGNNASGSANPVYAPVAML  360
 361 PAGLQPHSHRKQHQQQQQGQRHSGSEGRRSGDAGDGSSSSPAVSSSSQTTSA
Interface Residues: 64, 237, 277, 278, 281, 282, 285, 286
3D-footprint Homologues: 4efj_A, 7d3t_D, 6j5b_C, 6qec_A
Binding Motifs: M1363_1.02 wagATtCysy
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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