Transcription Factor

Accessions: 4rb2_D (3D-footprint 20231221)
Names: DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport(Fur family), V6F4Q0_MAGGM
Organisms: Magnetospirillum gryphiswaldense, strain DSM 6361 / JCM 21280 / NBRC 15271 / MSR-1
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: V6F4Q0
Length: 134
Pfam Domains: 12-130 Ferric uptake regulator family
Sequence:
(in bold interface residues)
1 MVSRIEQRCIDKGMKMTDQRRVIAQVLSDSADHPDVEEVYRRATAKDPRISIATVYRTVR 60
61 LFEEESILERHDFGDGRARYEEAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARKHGF 120
121 RLVGHRLELYGVPL
Interface Residues: 15, 37, 51, 52, 53, 54, 56, 57, 60, 61, 64, 72, 78
3D-footprint Homologues: 4rb3_D, 7vo0_N, 7vpz_N, 7x74_H, 6jgx_B, 1k82_A
Binding Motifs: 4rb2_CD TnnnTGCAAAnnnTnTGC
4rb2_D TTTGCAnntA
Binding Sites: 4rb2_A
4rb2_B
Publications: Deng Z, Wang Q, Liu Z, Zhang M, Machado AC, Chiu TP, Feng C, Zhang Q, Yu L, Qi L, Zheng J, Wang X, Huo X, Qi X, Li X, Wu W, Rohs R, Li Y, Chen Z. Mechanistic insights into metal ion activation and operator recognition by the ferric uptake regulator. Nat Commun : (2015). [Pubmed]
Related annotations: PaperBLAST

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