Transcription Factor

Accessions: 1h9t_A (3D-footprint 20231221)
Names: FADR_ECOLI, FATTY ACID METABOLISM REGULATOR PROTEIN
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P0A8V6
Length: 232
Pfam Domains: 7-67 Bacterial regulatory proteins, gntR family
68-227 FadR C-terminal domain
Sequence:
(in bold interface residues)
1 AQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQ 60
61 HGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKA 120
121 QEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPE 180
181 ARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNLLAIQGR
Interface Residues: 29, 30, 31, 34, 40, 41, 42, 43, 44, 45, 46, 47, 60, 61, 66
3D-footprint Homologues: 6wg7_G, 4wwc_B, 4h0e_A, 4p9u_F, 1h9t_B, 6za3_B, 4u0y_B, 3mzh_A, 4fx4_B
Binding Motifs: 1h9t_AB TGGTnCgACCA
Publications: van Aalten D.M, DiRusso C.C, Knudsen J. The structural basis of acyl coenzyme A-dependent regulation of the transcription factor FadR. The EMBO journal 20:2041-50 (2001). [Pubmed]
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.