Transcription Factor

						

			
Accessions: T057795_1.02 (CISBP 1.02)

			
Names: CG17181, T057795_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 442
Pfam Domains:   119-141 C2H2-type zinc finger
  119-141 Zinc finger, C2H2 type
  119-143 C2H2-type zinc finger
  151-173 C2H2-type zinc finger
  177-198 C2H2-type zinc finger
  177-198 Zinc finger, C2H2 type
  177-194 C2H2-type zinc finger
  191-214 Zinc-finger double domain
  204-227 C2H2-type zinc finger
  204-226 C2H2-type zinc finger
  204-226 Zinc finger, C2H2 type
  204-224 Zinc-finger of C2H2 type
  218-242 Zinc-finger double domain
  231-241 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MTKDQQATPIPEELYNLTQLAEVTLSVGPLVTDEVKPLPLYASSDDDSNYYSHKVFDRRK   60
  61 LRRCTISDSNSCASSSSSSTSSRQSSEDHLGLQGHSSVHHHHGEQGEILNSTSLLEDEHI  120
 121 CPECGKKYSTSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQF  180
 181 CGKRFSRPWLLQGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKA  240
 241 FALKSYLYKHEESSCMKNRGGVPGSGAASGNRPPSSPKRQQAEVTSGTISALAPGSPAAA  300
 301 VCAASDSAKSTLANKLLQKEKDRRQAAMAFQGFPAGPEVTAYSHATSAQEEYEKFKRINV  360
 361 IQPKVMPHRVPSLYQDLLPNRHVPLALPLAMPYHFQGQATSTGQSDPTSVQEQPVDFSPK  420
 421 NNFTHSAKTSPFELTGNYAMVA
Interface Residues: 129, 130, 132, 133, 136, 140, 161, 162, 163, 164, 166, 167, 169, 170, 173, 186, 187, 188, 189, 190, 193, 214, 215, 216, 217, 218, 220, 221, 222, 225, 242, 243, 244, 245, 246, 247, 248, 249, 250
3D-footprint Homologues: 7w1m_H, 8ssq_A, 8ssu_A, 5kkq_D, 5ei9_F, 1ubd_C, 5yel_A, 6ml4_A, 6blw_A, 5k5l_F, 7ysf_A, 2jpa_A, 1tf3_A, 8cuc_F, 7y3l_A, 7n5w_A, 3uk3_C, 5k5i_A, 2kmk_A, 1llm_D, 5v3j_F, 6u9q_A, 4x9j_A, 2gli_A, 1f2i_J, 1tf6_A, 8gn3_A, 1g2f_F, 5kl3_A, 6jnm_A, 8h9h_G, 6a57_A, 6e94_A, 7y3m_I, 2drp_D, 2wbs_A, 5yj3_D, 7txc_E, 4m9v_C, 2lt7_A
Binding Motifs: M4831_1.02 ACAGGTGGt
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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