Transcription Factor

						

			
Accessions: AtMYB115 (AthaMYB 1.0)

			
Names: AtMYB115, Myb domain protein 115, Myb family transcription factor
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q1PDP9
Length: 360
Pfam Domains:   158-204 Myb-like DNA-binding domain
  161-221 Myb-like DNA-binding domain
  210-252 Myb-like DNA-binding domain
  213-255 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MYHQNLISSTPNQNSNPHDWDIQNPLFSIHPSAEIPSKYPFMGITSCPNTNVFEEFQYKI   60
  61 TNDQNFPTTYNTPFPVISEGISYNMHDVQENTMCGYTAHNQGLIIGCHEPVLVHAVVESQ  120
 121 QFNVPQSEDINLVSQSERVTEDKVMFKTDHKKKDIIGKGQWTPTEDELLVRMVKSKGTKN  180
 181 WTSIAKMFQGRVGKQCRERWHNHLRPNIKKNDWSEEEDQILIEVHKIVGNKWTEIAKRLP  240
 241 GRSENIVKNHWNATKRRLHSVRTKRSDAFSPRNNALENYIRSITINNNALMNREVDSITA  300
 301 NSEIDSTRCENIVDEVMNLNLHATTSVYVPEQAVLTWGYDFTKCYEPMDDTWMLMNGWN*  360
Interface Residues: 158, 192, 193, 194, 195, 197, 198, 201, 202, 203, 205, 207, 244, 245, 248, 249, 252, 253, 254
3D-footprint Homologues: 1vfc_A, 3osg_A, 2kdz_A, 7xur_A, 1mse_C, 3zqc_A, 5eyb_B, 6kks_A, 8ity_W
Binding Motifs: AtMYB115_II GTTAGTTA
AtMYB115_I kwCwGTTr
Binding Sites: GTTAGTTA
GTCAGTTA
TACTGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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