Transcription Factor

Accessions: 1h9t_B (3D-footprint 20231221)
Names: FADR_ECOLI, FATTY ACID METABOLISM REGULATOR PROTEIN
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P0A8V6
Length: 226
Pfam Domains: 7-67 Bacterial regulatory proteins, gntR family
68-226 FadR C-terminal domain
Sequence:
(in bold interface residues)
1 AQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQ 60
61 HGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKA 120
121 QEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPE 180
181 ARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNL
Interface Residues: 29, 30, 31, 34, 40, 41, 42, 43, 44, 45, 46, 47, 60, 61, 66
3D-footprint Homologues: 6wg7_G, 4h0e_A, 4p9u_F, 4wwc_B, 1h9t_B, 6za3_B, 4u0y_B, 3mzh_A, 4fx4_B
Binding Motifs: 1h9t_AB TGGTnCgACCA
1h9t_B bGGynC
Binding Sites: 1h9t_X
1h9t_Y
Publications: van Aalten D.M, DiRusso C.C, Knudsen J. The structural basis of acyl coenzyme A-dependent regulation of the transcription factor FadR. The EMBO journal 20:2041-50 (2001). [Pubmed]
Related annotations: PaperBLAST

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