Transcription Factor

						

			
Accessions: T082898_1.02 (CISBP 1.02)

			
Names: NCU06173, T082898_1.02;
Organisms: Neurospora crassa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Forkhead
Length: 806
Pfam Domains:   209-299 Fork head domain
Sequence: 
(in bold interface residues)		   1 MMAKQVRYGAVQPLQIYQDDLYDQTTPVISQAPMPLAAKPPRRPLQPANSNSVMLRPPST   60
  61 MAPLQKSPLKLANARISDSSSAPTKPPQGQKKLSNVQMPPPGALAPSTDSLHKQQPMSRF  120
 121 KTVASKPPAQDLTNLQFVDQSPQMTIFPAPTQFNLPLENFYQKPSGKRVLTDSPTSDKES  180
 181 RPAKKQNTGEPTPVPEPGSFSPIIDDGTKPHHSYATLIGMAILRSPQRRLTLSQIYKWIA  240
 241 ETFSFYQLSDSGWQNSIRHNLSLNKHFIKQERPKDDPGKGNYWAIEPGAEQFFMKEKPSR  300
 301 KAPPSAENLPVMSTRLEPSQPPLGVQPQEPNSPSSRANKPQPQLSQAPSPRPQPPQAPLP  360
 361 DEPVLPPQPPTTQAQLAPRPPSSQAALMPLLPELSSDATIPASEIGSVEDVTYQGFEHGV  420
 421 SNDSNLYSPLPAIVQSSPPVPKHLEARHSTTPPQPRTKGRRKKWTTSMDDSGYISSLDSS  480
 481 ILRPSQHSNLLNSADHPRLSTGRAEEEIARLRTSSYDSPSKGRSYSYAPPSSSPPLRQAS  540
 541 ATKSGQMLPPLTPAMKLKAPPMPPPSVSPTTNLRLHRESVQSMVDATYQRVAALLPEDDS  600
 601 LLQLTPNPTLTLDDMLYGFERGTDNVTSEIDIFQDSPFGYYNFGVSPAINQYNGSPVKQS  660
 661 ARRQRPERSQSTGALTDMTSFSRGNGNDAASFLKVPSQPVDLNTGTPSKVFEGLPSSPSK  720
 721 VFLESPCKINSASNDNLENLEPWMTMNDLCGSDFLEDSDFSGIDMLAGFEKIGSTPANTS  780
 781 RPTNNAPTIAGLPPRQAYSRCYSNIF
Interface Residues: 232, 249, 251, 252, 254, 255, 256, 258, 259, 260, 262, 263, 272, 279
3D-footprint Homologues: 8vfz_O, 3l2c_A, 8bzm_E, 7vox_H, 2hdc_A, 7yz7_A, 6el8_A, 7tdx_A, 7yzb_A, 6nce_A, 2uzk_A, 7vou_C, 2a07_J, 7yze_A, 7cby_C, 3co6_C, 6ako_C, 2c6y_A, 7yzg_A, 7tdw_A, 3g73_A, 8sro_B, 3qrf_G
Binding Motifs: M0744_1.02 rTAAACAw
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.