Transcription Factor
| Accessions: | T078662_1.02 (CISBP 1.02) |
| Names: | ELK4, T078662_1.02; |
| Organisms: | Tetraodon nigroviridis |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Ets |
| Length: | 444 |
| Pfam Domains: | 5-86 Ets-domain |
| Sequence: (in bold interface residues) | 1 MDNSVTLWQFLLQLLLDSSNEQLICWTNDEGEFKLLQAEEVARLWGARKNKPNMNYDKLS 60 61 RALRYYYDKNIIKKVNGQKFVYRFVSYPDILKGDVASRAEGDVPPQAKRGESALLEGESA 120 121 DHSKVGGGASSKQSSRNDYIHSGLYTSFTLNSLQNGRQLFKSIKIENPAEKMADRRNAGA 180 181 PAQSHLSQEQLSHAQPPTLSSVIKFVNTPPKPAAAPTPAPPPQVEAEPPLMPNPLDPLPG 240 241 AAQRPEGLAGPSQPVYSFEQAQQSDPAFSLQDLTSTNPSPNLVLYSSQDLVIDSDMESQP 300 301 VHPQAPEKQIQEQYNAILLEKVSTQSSGKTRKPPKVLQISPPTLLVTASDFSPMSLCSPS 360 361 LPTPSLTPAMIPTPTLLLTPSPLLSNIHFWSTLSPVAPLSPATRRQGAHLFQFPSVLTPQ 420 421 FQIPVHSMDGTNTPGPISPDLQKT |
| Interface Residues: | 57, 58, 60, 61, 62, 64, 65, 79 |
| 3D-footprint Homologues: | 8ee9_F, 4mhg_A, 2stt_A, 4uno_A, 3jtg_A, 1dux_F, 7jsa_J, 3zp5_A, 1yo5_C, 4bqa_A, 1awc_A, 4iri_A, 1bc8_C, 4l18_B, 4lg0_B |
| Binding Motifs: | M0711_1.02 CCGGAAGT |
| Related annotations: | PaperBLAST |
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