Transcription Factor
| Accessions: | UP00031A (UniPROBE 20160601) |
| Names: | Zbtb3, zinc finger and BTB domain containing 3, Zinc finger and BTB domain-containing protein 3 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q91X45 |
| Description: | zinc finger and BTB domain containing 3: Mus musculus RIKEN cDNA 4930563M09 gene (4930563M09Rik), mRNA |
| Length: | 82 |
| Pfam Domains: | 17-38 Zinc finger, C2H2 type 18-38 C2H2-type zinc finger 31-54 Zinc-finger double domain 44-67 Zinc finger, C2H2 type 44-67 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 YEAAQGSFGNFTEDVPTCKTCGKTFSCSYTLRRHATVHTRERPYECRYCLRSYTQSGDLY 60 61 RHIRKAHNEDLAKRSKPDPEAS |
| Interface Residues: | 19, 22, 23, 26, 27, 28, 29, 30, 31, 32, 33, 34, 54, 55, 56, 57, 58, 59, 60, 61, 62, 65 |
| 3D-footprint Homologues: | 4u7b_B, 3uk3_C, 1tf3_A, 8cuc_F, 7y3l_A, 7n5w_A, 1ubd_C, 6u9q_A, 4x9j_A, 2jpa_A, 1mey_C, 5kl3_A, 2drp_D, 7ysf_A, 1f2i_J, 6wmi_A, 5ei9_F, 2kmk_A, 6jnm_A, 5und_A, 2gli_A, 1g2f_F, 6a57_A, 5k5i_A, 8ssu_A, 6ml4_A, 1llm_D, 6blw_A, 5kkq_D, 8h9h_G, 4m9v_C, 5v3j_F, 7y3m_I, 6e94_A, 8ssq_A, 7w1m_H, 7eyi_G, 2lt7_A, 2i13_A, 8gn3_A, 2wbs_A, 7txc_E, 5yj3_D, 1tf6_A, 5yel_A |
| Binding Motifs: | UP00031A_1 rabbsCACTGCAytbsk UP00031A_2 caatcACTGgyArwww |
| Binding Sites: | ATCCAGTG AATGCAGT ACACTGCA ACTGCAGC ACTGCAGT ACTGCATA ATGCAGTG CACTGCAA CACTGCAC CACTGCAG CACTGGAA CCACTGCA CGCTGCAG GCACTGCA GCACTGGA GCAGTGAC GCAGTGCA GCGCTGCA TCACTGCA TCACTGGA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.