Transcription Factor

Accessions: Q8N100 (JASPAR 2024)
Names: ATOH7_HUMAN, Atonal bHLH transcription factor 7, bHLHa13, Class A basic helix-loop-helix protein 13, hATH5, Helix-loop-helix protein hATH-5, Protein atonal homolog 7, Transcription factor ATOH7
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q8N100
Length: 152
Pfam Domains: 41-92 Helix-loop-helix DNA-binding domain
Sequence:
(in bold interface residues)
1 MKSCKPSGPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAF 60
61 DRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFGSERDWVGLHCEHFGRDH 120
121 YLPFPGAKLPGESELYSQRLFGFQPEPFQMAT
Interface Residues: 42, 45, 46, 48, 49, 50, 52, 53, 63, 78
3D-footprint Homologues: 7z5k_B, 2ypa_A, 6od3_F, 5i50_B, 7f2f_B, 7rcu_E, 5eyo_A, 8osl_P, 2ypa_B, 2ql2_A, 2ql2_D, 7ssa_L, 5gnj_I, 4h10_A, 5v0l_B, 5nj8_C, 4x0q_B, 8e24_A
Binding Motifs: MA1468.1 AmCATATGky
Publications: Mao CA, Cho JH, Wang J, Gao Z, Pan P, Tsai WW, Frishman LJ, Klein WH. Reprogramming amacrine and photoreceptor progenitors into retinal ganglion cells by replacing Neurod1 with Atoh7. Development 140:541-51 (2013). [Pubmed]
Related annotations: PaperBLAST

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