footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Transcription Factor

Accessions:	Q16520 (JASPAR 2024)
Names:	B-ATF, B-cell-activating transcription factor, Basic leucine zipper transcriptional factor ATF-like, BATF_HUMAN, SF-HT-activated gene 2 protein, SFA-2
Organisms:	Homo sapiens
Libraries:	JASPAR 2024 ¹ ¹ Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot:	Q16520
Length:
Binding Motifs:	MA0462.1 rrwATGAsTCA MA0462.2 waTGACTCAth MA1634.1 waTGACTCAth MA0462.3 TGACTCA MA1634.2 TGACTCA
Binding Sites:	MA1634.2.2 MA0462.3.1 / MA0462.3.12 / MA0462.3.13 / MA0462.3.14 / MA0462.3.16 / MA0462.3.18 / MA0462.3.2 / MA0462.3.4 / MA1634.2.11 / MA1634.2.17 / MA1634.2.19 / MA1634.2.3 / MA1634.2.5 / MA1634.2.6 / MA1634.2.7 / MA1634.2.8 / MA1634.2.9 MA0462.3.3 / MA0462.3.5 / MA0462.3.6 / MA0462.3.7 / MA0462.3.8 / MA0462.3.9 MA0462.3.20 / MA1634.2.14 MA0462.3.11 / MA0462.3.15 / MA0462.3.17 MA0462.3.19 / MA1634.2.15 MA0462.1.1 MA0462.1.10 MA0462.1.11 MA0462.1.12 MA0462.1.13 MA0462.1.14 MA0462.1.15 MA0462.1.16 MA0462.1.17 MA0462.1.18 / MA0462.1.19 MA0462.1.2 MA0462.1.20 MA0462.1.3 MA0462.1.4 MA0462.1.5 MA0462.1.6 MA0462.1.7 MA0462.1.8 MA0462.1.9 MA0462.3.10 / MA1634.2.10 / MA1634.2.16 MA0462.2.1 MA0462.2.10 / MA0462.2.5 MA0462.2.11 / MA0462.2.6 MA0462.2.12 MA0462.2.13 MA0462.2.14 MA0462.2.15 / MA0462.2.7 MA0462.2.16 MA0462.2.17 / MA0462.2.8 MA0462.2.18 MA0462.2.19 / MA0462.2.9 MA0462.2.1 / MA0462.2.2 MA0462.2.10 / MA0462.2.20 MA0462.2.2 / MA0462.2.3 MA0462.2.4 MA0462.2.3 / MA0462.2.5 MA0462.2.6 MA0462.2.4 / MA0462.2.7 MA0462.2.8 MA0462.2.9 MA1634.1.19 MA1634.1.20 MA1634.1.1 MA1634.1.10 / MA1634.1.7 MA1634.1.11 MA1634.1.12 / MA1634.1.8 MA1634.1.13 MA1634.1.14 / MA1634.1.9 MA1634.1.15 MA1634.1.10 / MA1634.1.16 MA1634.1.17 MA1634.1.18 MA1634.1.11 / MA1634.1.19 MA1634.1.2 MA1634.1.13 / MA1634.1.20 MA1634.1.3 MA1634.1.3 / MA1634.1.4 MA1634.1.5 MA1634.1.5 / MA1634.1.6 MA1634.1.7 MA1634.1.6 / MA1634.1.8 MA1634.1.9 MA0462.2.11 MA0462.2.12 MA0462.2.13 MA0462.2.14 MA0462.2.15 MA0462.2.16 MA0462.2.17 MA0462.2.18 MA0462.2.19 MA0462.2.20 MA1634.1.4 MA1634.1.12 MA1634.1.14 MA1634.1.15 MA1634.1.16 MA1634.1.17 MA1634.1.18 MA1634.1.2 MA1634.2.1 / MA1634.2.13 / MA1634.2.4 MA1634.2.20 MA1634.2.12 MA1634.2.18
Publications:	Li P, Spolski R, Liao W, Wang L, Murphy TL, Murphy KM, Leonard WJ. BATF-JUN is critical for IRF4-mediated transcription in T cells. Nature 490:543-6 (2012). [Pubmed] Schleussner N, Merkel O, Costanza M, Liang HC, Hummel F, Romagnani C, Durek P, Anagnostopoulos I, Hummel M, Jöhrens K, Niedobitek A, Griffin PR, Piva R, Sczakiel HL, Woessmann W, Damm-Welk C, Hinze C, Stoiber D, Gillissen B, Turner SD, Kaergel E, von Hoff L, Grau M, Lenz G, Dörken B, Scheidereit C, Kenner L, Janz M, Mathas S. The AP-1-BATF and -BATF3 module is essential for growth, survival and TH17/ILC3 skewing of anaplastic large cell lymphoma. Leukemia 32:1994-2007 (2018). [Pubmed]
Related annotations:	PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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