Transcription Factor
| Accessions: | T001941_1.02 (CISBP 1.02) |
| Names: | PFF0670w, T001941_1.02; |
| Organisms: | Plasmodium falciparum |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AP2 |
| Length: | 4109 |
| Pfam Domains: | 3087-3136 AP2 domain 3676-3725 AP2 domain 4035-4088 AP2 domain |
| Sequence: (in bold interface residues) | 1 MENKEENYKNYMEEIKKVSNIIQAKSIDCFESNSTIDENKIMNVNDICNIYMVDKTCERN 60 61 NIYRKDIDKEYLHEENQKKKDKEKNLCVQKKGDIIESSISNTNDIIKCNNNSNEYNHNIG 120 121 KDKKLEKFKSFIIEDSNSSSSGKKKYNINDVYKVIKSFLFKYMENDKKRGVNKMVGDNEM 180 181 AGDNQMEGDNQMEGDNQMEGDNEMEGDNEMEGDNKMEGDNKMEGDNQMVDDNEMAGDNQM 240 241 VDDNQMAGDNQISEGSNQFKHPHYPDVRSVGMCLYYILRGKVNVNVLKKIFSDKKNDKHE 300 301 NTKRNYNINDEHNDKNKEKDLDVDNIEEESNIAQDNNGILNKENHLNAEKIFKYLNDLFN 360 361 QEEIININNTEGKECDKVYEDIAWTFVKYIENNNINLMEDFVKCSSNDVSGELPDVAMEN 420 421 YNENFKNNDISQNNDMSQNNDMSQNNDMSQNNDILQNNDMSQNNDMSQNNDMSQNNDMSQ 480 481 NNDMSQNNDILQNNDILQNNDILQNNDILQNNDMSQNNDMSQNNDMSQNNNTPHKKHQIN 540 541 NSIKKNSNIIRTFGPFNNVKNVIIHIPLFLRYFIQTHVSSTKARTNRCVYNNDENKKKLK 600 601 KKMMKEIMIGVLNSDVNKFFEELLCNIKACFLEILDYLKEYCRSKCIQFNDENYFYHFTQ 660 661 IISIEKTYFDLKTILFYTKKYDKIKKKIIKRIRNRISSDEFNDEHNKIVTEDIEKLNGHI 720 721 FDVSTNKYVYPIKNKILTNQKENYYEWMLPTIYNKDDDIQSDQLNKHTNKHNGKVYNRFI 780 781 NRCFKRKLYHHEHEKNEPFDNMTHKQIKLDSVSTDMNSKKYYLLKNETSPLERHNKDKDT 840 841 ITSSNISFLKNTPSEYMLHKEHVINRVTKNDDMQDDKYETSKNSDQHNDNERNGNIYNND 900 901 DNNDDDNNDDDNNNNNNDNNNDEEEDNIYYAPSNMRTGIEVDNENGNEDIYKKVHLENNV 960 961 YDNIIYDDYKTIQNQNTKIVDNVDNNTFVKMKKMKDSNECGLNNNQHYNNEHINNDHSNN 1020 1021 MYIEDEEIRIPAERNQGEKELNKINRINEDKKDPLSQEQYYKRITRKSKAKVMIEPNDEK 1080 1081 IELGTGYNNVKENDDMEYTKEMYDNVGKISSYEDIKKQRKRKRTRRKANDKPGNGQNNQD 1140 1141 GQNDQDGQDGQDGQNNQDGQNNQDIKSMQNYMHHLNVTNDDLINNDNTNSKVLSNISQNH 1200 1201 DSTKINSTIKIKESTSFEKETLNILTRSSKDDPNTCDNPEGVDININTQKKDNNNNNNNN 1260 1261 NNNNNNNNNVHNNVHNNVHNNVHNNVHNNVHNNNFIKCIEKESNDGNTPHASPLIIKHNT 1320 1321 DHMINFKCYSNDYIINMNKKRNKIKKKCINKIMSSIFSEKIYKYALIFSPILKNDGCVSL 1380 1381 LSVHALKNIVLKLYHLRIVEMQQNVYKNNKYNINNYNNEIYNEKRNNFLHMYHNHIITPT 1440 1441 EETYINNENNNNLENIKNYKGANNKEFKKISCEKNYKCNLSTRNYDKMDEFYNTKNESDI 1500 1501 EIIQNLNNMSTAEYYDMKENLNMNILIRQFLKKNLNEENWNIFWEWLYENDDINISTFKK 1560 1561 HIINHIKDILLKRDVINRSCPHEMIEPDMSEGHINMANKNNNYNNYNNYNNYNNYNNYNN 1620 1621 YNNYNNYNNYNNDEKERIEELLKFYITNNRGINLEYNKVKEILEQGKCNAYYNNEKKMEM 1680 1681 LNNEYLHDNILDYIRANVLYEGYMNKDDINKKRDNENNNNNNMNTFVTNIKSGHENNHNN 1740 1741 VYNFCNSDHRFSHDISNEKGENINNMSNSLCQYKRTHMHNYIYNEDDQNIHIDDKSYIQT 1800 1801 LKDLNDLRSMYKNKHADILQEINECDFLFEDEKCRYNTEHNNINNNNNNNKNNIFRDKEK 1860 1861 KNNNINNDLENYYFYNKHIYNSMDDLYVEKENGHNVNNNKNNDGGDADGDADGDDNGDDN 1920 1921 GDDNGDDNGDDNGDDNGDDNGDDYDEDNIKLADLTYKLNDYNIKNNNNMKNKNKNTNKRD 1980 1981 IIYKVKDLSCKLSELYNNTTDLTYNLNDSDDDHNNYNMMNVEQSNKYENNNDIIGEQKDI 2040 2041 DQNNNISKKYDAKEQFINDNGNNKDNNMNIHKKNKNYDHIRNEISTRSITKEMNCKENIL 2100 2101 NLIKNKNLSVQDILYYQKLLLCLKYVGDHNSAINNNETDQKDEAKEKDEAKEKGEAKEKE 2160 2161 KDETNETYQTNETYQTNETYQTNETYQTNERDEIDESSKNFKNFKDYINYINYKNYKNYK 2220 2221 NYNNNNIQGVHNSFNYENNNNIFIKNKMNNVYSYLKNIPYTNRNNNCFINKYYNSKYLNN 2280 2281 HQYNQNDPIYKNMNNSVGNNYIKNNEMINHIHTYNNLINNHNFNKYDDDYNNFLNHLYNE 2340 2341 KMICNSFNGHVNNNNNNNNIHMNNNNNNNNNNNNNNNNNNNNSMNNDLLNLLYLYELSQK 2400 2401 NKNQNVPQINNEYIYYYLNKYISKNMNISDSTMRNEQDKYVQPNEQRYDKQDYNDLNCFI 2460 2461 NDHINNNRTYPSNDDKDKHNHNNHNNYTKEKYCRLTENNNKEIEVFPQNNYLIKNKKNAQ 2520 2521 GNFTLSLDDEAILSSYNNPEKNNTVCKNNYKNDKNYYVQEEENYSRHENDIRMLENYEKN 2580 2581 LKEKIPYHMKNKYLVMSSQNNNNCAYSPNMEIYMNKLKYTRLRKKNKYDMDVMDDTDDTD 2640 2641 DMDDMDDMDDRNGKYGKYDRYNKYDRHDRYGKYGKYNKYDKYHRYNKYNNYLSTLSYSNM 2700 2701 NDIEHNTHMDELGQYLLVPGGDTQNYEHEEDAKHNEHNEYNEYKKYNEHNKYNEHNKYNK 2760 2761 YNEHNNIFGSNNHTNRRHLRRPHERTHDNFNLYNNNNMLDNFVRCYNRNNKNSSSPFFIN 2820 2821 KDLYNSFEDLNESSNDEDTLRHDNYFRKRKRTHLKGKYVLQRQENDLDVMCNMDEYDNMR 2880 2881 NNKYNYNHYEDREDGAGHYGDDDDENMNMLKNRNMYSQSLLNHRKLNDKEKDNIYGSVYN 2940 2941 KRKGFRAQVSSAGNKTEEEKNRSGFLNTDITPEYGRGRRTKVVNQNYVKNYECDTKYYSK 3000 3001 KEKTNTLTNMHINVMNNNNNGSLCDVNNKDKIKTNVDSSLINKNNKSNITTRKINNCNNN 3060 3061 NKMKNNILDNNEDYETKLACSELKPQRGVYFDKSQKAWIGSWYEEGKQIKRRFKIKYYGW 3120 3121 DEAKSLAIKARFAFENKTKNLKGKKGPISKNKNDKNEKDANDNVNNVNNVNNVNNVNGNV 3180 3181 NDNINNVNNVNGNVNDNINNVNNVNGNVNDNINNVNDVKDNHIDDTQPVTNSEPMNINTC 3240 3241 PIKSPELLKDNKENDMNNIHVDNIVSKRGMSTRNTGVHLSKNNNINNDNNNTNKRDTRRN 3300 3301 FYKRRSYTHDHYMNTENKEFINERKKKKTNMSNNKNNEKNEKNGNNDVINNDNNDVNNDD 3360 3361 NNISNISSNNDVLQNSQHDINIKNEIDTNMLYSYNNKHNSDINLSSYNNLNQKNNTYNDH 3420 3421 IFNDIQYDQNQNVQENFINKTSLSLQTNTNNTYSDLNHDKENENNRSQIVVNKQNDNVHT 3480 3481 KQEYKEKSQMDSQNNSSIHDYINKENYMNENMMMSHVDGMYIPGTYMSNSDITYKKNNNY 3540 3541 LNYEDVINYDQSKTKYHQQDKSDHNNDGDNNNDDNNNDNNNNDDNYHLCNKYNTEPYSHL 3600 3601 NNNNEETKLEECSSVNVSNKKNINNINKIENKNTKNVYLKYSYCKSLENCNTYTKGNNKK 3660 3661 SGDQPNMTDQSIKLPQGVFYQDSKKAFCANWYSNGKQEKRYFSINKFGEEKARNLAIAAR 3720 3721 KKFENVYKKNGHGNKKDNSISSIVKNNQTNDIIIKSQENNDEMLYHKNDQSDQITKKEII 3780 3781 DQELYSSNLLTNPLNNDIEEPKDKYKGPTSNSIVGSNNTTEVVNNNQIDDDYDGDEDIKQ 3840 3841 DKENNNMNDLNNEHVDKNYKNYPNITNITNEINYQDDKNFHQPNNTDPVKVQRGRKSSKN 3900 3901 INISQQNNKDDTYGNSHKNQNSENNINTTKKNNHSYTTNIDNNQNDHILNITKEITDNNN 3960 3961 LHLSNNEKINKNISYENLNIDHTTDDLLKSSGKDMKGETFNKHYSKNSLNKNLKKEVDDV 4020 4021 NMINKMEKTGSTPAGVYMIRINGVVQAWRAEWRSPSGCKRTKNFGINTYGTTLSKKLAIE 4080 4081 MRARMTGECLISDDGTVFDYSTKKGTMSN |
| Interface Residues: | 812, 813, 815 |
| 3D-footprint Homologues: | 5nwa_A |
| Binding Motifs: | M0064_1.02 TrGGCTTA |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.