Transcription Factor
| Accessions: | T161756_1.02 (CISBP 1.02) |
| Names: | col-21, T161756_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Zinc cluster |
| Length: | 921 |
| Pfam Domains: | 43-74 Fungal Zn(2)-Cys(6) binuclear cluster domain 221-469 Fungal specific transcription factor domain |
| Sequence: (in bold interface residues) | 1 MTALSLEEGSNFNVNVNHNGSSHHTRAVSDRPPPRKRRRIVISCTECHRRKQKCDRKLPC 60 61 TNCISRHRQDDCQYESGAPTVKQKQWHQQQPKRAQRTSSNETEIVSPGARLDENRGSSIT 120 121 EGHWSGESSTDDNNDHQHIASNVANVANLGYSTTGASTSTLSFIHKIETHSESSSIPHPS 180 181 STLPLSNADGRASTSPTDIVNRYKSLIRQLPARIYIERLVDVYFRDFNWQYSMLDRDIFD 240 241 AQLEEWYKIPFNVFNNGGPGAIPPDLRVFPALLFQVMSIVMLILPEKTGKRGREEVVTDG 300 301 RDEEGSGSGSEKRKVGSRGTANLGDKGGVDFEALKYTGNMTFEDLAKEYSESGVAILSLL 360 361 GKRQMTLTTVLAGFVRAAFLKFVAMVPEAWHAIGTAIRDAQELGLHRSSLDPRPPPSATA 420 421 ETILQNQWEIQRRRKVWLILVTWDIHCGATLGRPSTIDLTTNPPILPIDVALPTTTATTM 480 481 TTNCRSPTPIIPRSEENDPPTPLTRILWTYKITLQLVSILALEKEGPCPASFSKVDLLHQ 540 541 HLVDLENSIPSYFRLHNPDTRFDSLPQCYWIPWARALLPQLTAFNFMALHRPYIFTRPLS 600 601 RHLAVERGCLAMLRAQRTHFEILRREMRQNTFTLFFGTFDAIVLMGAVYILFPPKEKETG 660 661 TGEMVGEVVQQFKWAEERFEEMKERNNPLARQARGVVRGVGERLGRAVGVDLGQKGVGVG 720 721 LVSEGTVAVNKPTAVAVGGRRKRLARQRVVKSVTTAAQNGLSTASLSTSVPSGIASRASS 780 781 TTTPATATSTTTTTTGITTPESTAPPSFAQGHFGAATSEINTNTTITNNTFDASTTFSFT 840 841 NTATEAIPIDPSLNPALSPGVADWAAAASTIPSISLPSLPDDFNWTDISPIYATGDLVYN 900 901 DLTGFVVVMVVVMKMGWEESA |
| Interface Residues: | 34, 50, 51, 52, 77, 79, 80 |
| 3D-footprint Homologues: | 6o19_A, 2er8_C, 1hwt_C, 1zme_D, 6gys_C |
| Binding Motifs: | M1733_1.02 TAwCkCCG |
| Related annotations: | PaperBLAST |
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