Transcription Factor
| Accessions: | T049413_1.02 (CISBP 1.02) |
| Names: | T049413_1.02;, Zfp637 |
| Organisms: | Mus musculus |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:C2H2 ZF |
| Length: | 153 |
| Pfam Domains: | 76-98 C2H2-type zinc finger 76-98 Zinc finger, C2H2 type 76-86 C2H2-type zinc finger 90-113 Zinc-finger double domain 103-124 C2H2-type zinc finger 104-126 Zinc finger, C2H2 type 104-126 C2H2-type zinc finger 118-142 Zinc-finger double domain 132-152 Zinc finger, C2H2 type 132-142 C2H2-type zinc finger 132-152 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHKYDPSEATGSSSWDFQSSFRREKLEQKSPE 60 61 SKALQEDSPGVRQKVYDCQECGKSFRQKGSLTLHERIHTGQKPFECTQCGKSFRAKGNLV 120 121 THQRIHTGEKPYQCKECGKSFSQRGSLAVHERL |
| Interface Residues: | 59, 61, 62, 65, 76, 86, 87, 88, 89, 90, 92, 93, 94, 99, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 125, 142, 143, 144, 145, 146, 147, 148, 149 |
| 3D-footprint Homologues: | 5ei9_F, 2kmk_A, 7n5w_A, 6jnm_A, 1tf3_A, 8cuc_F, 7y3l_A, 1tf6_A, 8gn3_A, 2jpa_A, 1g2f_F, 5kl3_A, 1ubd_C, 7ysf_A, 6ml4_A, 6blw_A, 6u9q_A, 4x9j_A, 2gli_A, 1f2i_J, 5kkq_D, 8h9h_G, 4m9v_C, 7y3m_I, 2lt7_A, 6e94_A, 6a57_A, 7w1m_H, 3uk3_C, 2wbs_A, 5yj3_D, 7txc_E, 5k5i_A, 1llm_D, 5v3j_F, 2drp_D, 8ssq_A, 5k5l_F, 5yel_A |
| Binding Motifs: | M0437_1.02 tatrtatrt |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.