Transcription Factor
| Accessions: | A0A1D6LHJ4 (JASPAR 2024) |
| Names: | A0A1D6LHJ4_MAIZE |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 368 |
| Pfam Domains: | 38-69 Myb-like DNA-binding domain 153-196 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MSSLLCISRRNNKKDSDGDGEYGGEQIIISTGGAAMRKGPWTDEEDEQLVRFVRLFGERR 60 61 WDFLAKVSGLRGGGCVDRSASMQLRMHEEGRSASIEQLAVFLTVCFFFFLLIFVAYLRAA 120 121 LVDTDGDVRAGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIAR 180 181 SLPGRTDNEIKNFWRTRTRKKALEERRAAAAATSTAAESASSVMTVSSSSECRRPPVSSS 240 241 SSSSSLRRDEARRSGDETEEASTPTAAPATKHDEEPQPQPQECYDFPMDQLWNEIAAADA 300 301 AAMSYLVVDACWGGAAVGGHCYYYGAAAASAASPPPPASPPWEYCGSDFSLWRIDDQEYY 360 361 KKMLDSSS |
| Interface Residues: | 135, 137, 138, 140, 141, 145, 146, 187, 188, 191, 192, 195, 196, 197 |
| 3D-footprint Homologues: | 2kdz_A, 6kks_A, 3osg_A, 3zqc_A, 1mse_C, 7xur_A |
| Binding Motifs: | MA1829.1 bttACCTAACyha MA1829.2 ACCTAAC |
| Binding Sites: | MA1829.1.1 / MA1829.1.3 MA1829.1.10 MA1829.1.11 MA1829.1.12 MA1829.1.13 MA1829.1.14 MA1829.1.15 MA1829.1.16 MA1829.1.17 MA1829.1.18 MA1829.1.19 MA1829.1.10 / MA1829.1.2 MA1829.1.20 MA1829.1.11 / MA1829.1.3 MA1829.1.13 / MA1829.1.4 MA1829.1.14 / MA1829.1.5 MA1829.1.15 / MA1829.1.6 MA1829.1.17 / MA1829.1.7 MA1829.1.19 / MA1829.1.8 MA1829.1.20 / MA1829.1.9 MA1829.2.16 / MA1829.2.3 MA1829.1.1 MA1829.1.12 MA1829.1.16 MA1829.1.18 MA1829.1.2 MA1829.1.4 MA1829.1.5 MA1829.1.6 MA1829.1.7 MA1829.1.8 MA1829.1.9 MA1829.2.1 / MA1829.2.8 MA1829.2.10 / MA1829.2.12 / MA1829.2.17 MA1829.2.11 / MA1829.2.4 / MA1829.2.5 / MA1829.2.7 / MA1829.2.9 MA1829.2.13 / MA1829.2.15 MA1829.2.14 / MA1829.2.18 MA1829.2.19 MA1829.2.2 MA1829.2.20 MA1829.2.6 |
| Publications: | Pollier J, De Geyter N, Moses T, Boachon B, Franco-Zorrilla JM, Bai Y, Lacchini E, Gholami A, Vanden Bossche R, Werck-Reichhart D, Goormachtig S, Goossens A. The MYB transcription factor Emission of Methyl Anthranilate 1 stimulates emission of methyl anthranilate from Medicago truncatula hairy roots. Plant J 99:637-654 (2019). [Pubmed] |
| Related annotations: | PaperBLAST |
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