Transcription Factor
| Accessions: | T060527_1.02 (CISBP 1.02) |
| Names: | FBgn0261705, T060527_1.02; |
| Organisms: | Drosophila melanogaster |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:B1H, family:C2H2 ZF |
| Length: | 362 |
| Pfam Domains: | 280-304 Zinc finger, C2H2 type 280-304 C2H2-type zinc finger 296-313 Zinc-finger double domain 310-334 C2H2-type zinc finger 327-350 Zinc-finger double domain 340-362 Zinc finger, C2H2 type 340-362 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MVFMNGLGSDPLSAKEAEGPPVQVEPVDLSLRSPRASTSHGSSSSSYKFSSANKAVGYSN 60 61 GKPGGSSGSSSSSGFGAGSAGSSSLGAFAAQQQQQLYASSGVSKLPFSPFFAASPFFFTY 120 121 RRISGSGSGNGTGSVSVKQEDNNNSCSYNNGSSSGGAGSAANSMQDYESKFSLLSLFKNP 180 181 YKFAGGDGQASRKTSPTGGSSKPLASNSSPSWKSYAGSGSPHAALNPAFGGMGRGATRKD 240 241 NSSFSGINFGGGGSAFGFTTSSDSMANGGYNDLSKNRKVHKCDTEGCDKVYTKSSHLKAH 300 301 KRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMR 360 361 RH |
| Interface Residues: | 260, 263, 266, 270, 292, 293, 294, 295, 296, 298, 299, 301, 302, 305, 322, 323, 324, 325, 326, 327, 328, 329, 330, 333, 350, 351, 352, 353, 354, 355, 356, 357, 358, 361 |
| 3D-footprint Homologues: | 8ssq_A, 8ssu_A, 5kkq_D, 6jnm_A, 6ml4_A, 3uk3_C, 8cuc_F, 1tf3_A, 7n5w_A, 2gli_A, 5ei9_F, 1g2f_F, 7ysf_A, 5v3j_F, 1ubd_C, 7w1m_H, 6blw_A, 5k5i_A, 2kmk_A, 6u9q_A, 5yel_A, 8h9h_G, 7y3m_I, 1tf6_A, 6e94_A, 2lt7_A, 6a57_A, 2jpa_A, 4m9v_C, 7y3l_A, 1f2i_J, 5kl3_A, 2wbs_A, 7txc_E, 1llm_D, 2drp_D, 4x9j_A, 8gn3_A, 5yj3_D |
| Binding Motifs: | M4889_1.02 rdwGGGyGTGGy |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.