Transcription Factor
| Accessions: | Q8S307 (JASPAR 2024), T00041 (AthalianaCistrome v4_May2016), BIL1/BZR1 (EEADannot 2025-01-07) |
| Names: | BZR1_ARATH, Protein BIN2 SUBSTRATE 2, Protein BRASSINAZOLE-RESISTANT 1, AT1G75080, BZR1, T00041;, Q8S307;AT1G75080 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1, AthalianaCistrome v4_May2016 2, EEADannot 2025-01-07 3 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] 2 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] 3 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: DAP-seq, family:BZR, family:Basic helix-loop-helix factors (bHLH) BES/BZR |
| Length: | 336 |
| Pfam Domains: | 19-161 Plant protein of unknown function (DUF822) |
| Sequence: (in bold interface residues) | 1 MTSDGATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLP 60 61 KHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLPGEIAGTSSRVTPYSSQNQSPLSSAF 120 121 QSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRNGGIPSSLPSLRISNSCPVTPPV 180 181 SSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPEC 240 241 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQMSPNTAAFQEIGQSS 300 301 EFKFENSQVKPWEGERIHDVGMEDLELTLGNGKARG |
| Interface Residues: | 23, 29, 33, 36, 37, 40, 41 |
| 3D-footprint Homologues: | 7vn3_C |
| Binding Motifs: | MA0550.1 mmkmCACGTGdvmm M0235 / MA0550.2 cCrCACGTGyrhmyywywht MA0550.3 CrCACGTGyr EEAD0070 crCACGTGyr |
| Binding Sites: | MA0550.1.1 MA0550.1.10 MA0550.1.11 MA0550.1.12 MA0550.1.13 MA0550.1.14 MA0550.1.15 MA0550.1.16 MA0550.1.17 MA0550.1.18 MA0550.1.19 MA0550.1.2 MA0550.1.20 MA0550.1.3 MA0550.1.4 MA0550.1.5 MA0550.1.6 MA0550.1.7 MA0550.1.8 MA0550.1.9 |
| Publications: | He J. X., Gendron J. M., Sun Y., Gampala S. S., Gendron N., Sun C. Q., Wang Z. Y. BZR1 is a transcriptional repressor with dual roles in brassinosteroid homeostasis and growth responses.. Science 307:1634-1638 (2005). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.