Transcription Factor
| Accessions: | 4p9u_F (3D-footprint 20231221) |
| Names: | FADR_VIBCH, Fatty acid metabolism regulator protein |
| Organisms: | strain ATCC 39315 / El Tor Inaba N16961, Vibrio cholerae serotype O1 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | Q9KQU8 |
| Length: | 272 |
| Pfam Domains: | 7-66 Bacterial regulatory proteins, gntR family 67-269 FadR C-terminal domain |
| Sequence: (in bold interface residues) | 1 KSPAGFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQH 60 61 GKPTKVNQFMETSGLHILDTLMTLDAENATSIVEDLLAARTNISPIFMRYAFKLNKESAE 120 121 RIMINVIESCEALVNAPSWDAFIAASPYAEKIQQHVKEDSEKDELKRQEILIAKTFNFYD 180 181 YMLFQRLAFHSGNQIYGLIFNGLKKLYDRVGSYYFSNPQARELAMEFYRQLLAVCQSGER 240 241 EHLPQVIRQYGIASGHIWNQMKMTLPSNFTED |
| Interface Residues: | 28, 29, 30, 33, 39, 40, 41, 42, 43, 44, 45, 46, 59, 60, 65, 66, 181, 209 |
| 3D-footprint Homologues: | 6wg7_G, 7b5y_B, 4wwc_B, 7zla_B, 4h0e_A, 4p9u_F, 6za3_B, 4u0y_B, 1h9t_B, 3mzh_A, 3zpl_B, 4fx4_B, 2gli_A |
| Binding Motifs: | 4p9u_F TnaCCa |
| Binding Sites: | 4p9u_G 4p9u_H |
| Publications: | Shi W, Kovacikova G, Lin W, Taylor R.K, Skorupski K, Kull F.J. The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand. Nature communications 6:6032 (2015). [Pubmed] |
| Related annotations: | PaperBLAST |
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