Transcription Factor

						

			
Accessions: T109709_1.02 (CISBP 1.02)

			
Names: CG3919, T109709_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:MADF
Length: 302
Pfam Domains:     22-95 Alcohol dehydrogenase transcription factor Myb/SANT-like
  210-245 BESS motif
Sequence: 
(in bold interface residues)		   1 MNTRRRSIAPPPNVYAINAKICHLVKLHPCLYDRHDDNYLRKSTVKNAWKEISNEMRNSV   60
  61 KSCKERWRNIRSSYARSIKLHHGANTYYLNSELKFLQKHITPGVPVPLRGRRSRPKGQEE  120
 121 HDEGDPETPVEAILEMVHSPSFLNSEHAQSRHSTDPASATDVEATQFNNEPSSIMDFEDT  180
 181 VPAEMRTESDSSEKEAKTSTRCIEALPIMDFDDAFLQGLRPEIKHMNFHQKLYFKRRVYD  240
 241 LLGEIFHSEQSASSTHPAQPHPRENVNGTLSTTSSLSSANPLQHMGLMLQLPKLVSKASK  300
 301 DL
Interface Residues: 61, 64, 65, 68, 69, 114, 235, 236, 237, 239
3D-footprint Homologues: 5eyb_B, 4yo2_A
Binding Motifs: M4860_1.02 srTGTYGCAsgdTsk
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.