Transcription Factor
| Accessions: | T138416_1.02 (CISBP 1.02) |
| Names: | NFATC2, T138416_1.02; |
| Organisms: | Tetraodon nigroviridis |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Rel |
| Length: | 301 |
| Pfam Domains: | 19-178 Rel homology domain (RHD) 195-283 IPT/TIG domain |
| Sequence: (in bold interface residues) | 1 SLPSLEWPIPSKSGQYQLFIQQQPRSHHRAHYETEGSRGAVKTPNGGHPEVQLFGYQGAD 60 61 QLGLQVFIGTADEKLLKPHAFYQVHRITGKTVTTPSVEKMVSGTKLLEIPLEPKNNMRVV 120 121 IDCVGILKLRNADIELRNGETDIGRKNTRVRLVFRVHIPQPGGQLLSLQVASDPIECSQR 180 181 SAQELPSVERQDLDRCSVLGGQQMVLTGLNFTADSKVIFSEKTQDGKQIWEVEATVDRDK 240 241 TQANMLFVEVPPYRDRFISHPAKVNFFVINGKKKRSQPQHFLYTPVIVAAIKAEPLDDSQ 300 301 L |
| Interface Residues: | 29, 31, 32, 34, 35, 38, 128, 145, 179, 180, 181, 210, 245, 272, 273 |
| 3D-footprint Homologues: | 1p7h_L, 1a66_A, 2o61_A, 1imh_C, 1nfk_A, 9bdw_A, 7cli_B, 1a3q_A |
| Binding Motifs: | M1522_1.02 wttTTCCryt |
| Related annotations: | PaperBLAST |
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