Transcription Factor
| Accessions: | ZNF415 (humanC2H2ZF-ChIP Feb2015) |
| Names: | ENSG00000170954, Q09FC8, ZNF415 |
| Organisms: | Homo sapiens |
| Libraries: | humanC2H2ZF-ChIP Feb2015 1 1 Najafabadi HS, Mnaimneh S, Schmitges FW, Garton M, Lam KN, Yang A, Albu M, Weirauch MT, Radovani E, Kim PM, Greenblatt J, Frey BJ, Hughes TR. C2H2 zinc finger proteins greatly expand the human regulatory lexicon. Nat Biotechnol 33:555-62 (2015). [Pubmed] |
| Notes: | TF family: C2H2 experiment: ChIP-seq/MEME/B1H-RC |
| Length: | 603 |
| Pfam Domains: | 284-302 Zinc-finger double domain 292-314 C2H2-type zinc finger 292-314 Zinc finger, C2H2 type 292-302 C2H2-type zinc finger 306-331 Zinc-finger double domain 319-330 C2H2-type zinc finger 320-342 C2H2-type zinc finger 320-342 Zinc finger, C2H2 type 337-359 Zinc-finger double domain 348-370 Zinc finger, C2H2 type 348-370 C2H2-type zinc finger 365-386 Zinc-finger double domain 375-386 C2H2-type zinc finger 376-398 Zinc finger, C2H2 type 376-396 C2H2-type zinc finger 391-414 Zinc-finger double domain 403-424 C2H2-type zinc finger 404-426 C2H2-type zinc finger 404-426 Zinc finger, C2H2 type 419-442 Zinc-finger double domain 431-445 C2H2-type zinc finger 432-454 C2H2-type zinc finger 432-454 Zinc finger, C2H2 type 446-471 Zinc-finger double domain 459-482 C2H2-type zinc finger 460-482 C2H2-type zinc finger 460-482 Zinc finger, C2H2 type 474-498 Zinc-finger double domain 487-506 C2H2-type zinc finger 488-508 C2H2-type zinc finger 488-510 Zinc finger, C2H2 type 502-526 Zinc-finger double domain 515-534 C2H2-type zinc finger 516-536 C2H2-type zinc finger 516-538 Zinc finger, C2H2 type 530-554 Zinc-finger double domain 543-563 C2H2-type zinc finger 544-566 C2H2-type zinc finger 544-566 Zinc finger, C2H2 type 558-582 Zinc-finger double domain 571-591 C2H2-type zinc finger 572-594 Zinc finger, C2H2 type 572-594 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MPELYTEDFIQGCDVGELQEPGLPGVLSYVGAQERALDHRKPSTSSKKTKRVEIDQRCEN 60 61 RLECNGAISAHCNLRLPDSNDSPASASRVAGITDLSRNCVIKELAPQQEGNPGEVFHTVT 120 121 LEQHEKHDIEEFCFREIKKKIHDFDCQWRDDERNCNKVTTAPKENLTCRRDQRDRRGIGN 180 181 KSIKHQLGLSFLPHPHELQQFQAEGKIYECNHVEKSVNHGSSVSPPQIISSTIKTHVSNK 240 241 YGTDFICSSLLTQEQKSCIREKPYRYIECDKALNHGSHMTVRQVSHSGEKGYKCDLCGKV 300 301 FSQKSNLARHWRVHTGEKPYKCNECDRSFSRNSCLALHRRVHTGEKPYKCYECDKVFSRN 360 361 SCLALHQKTHIGEKPYTCKECGKAFSVRSTLTNHQVIHSGKKPYKCNECGKVFSQTSSLA 420 421 THQRIHTGEKPYKCNECGKVFSQTSSLARHWRIHTGEKPYKCNECGKVFSYNSHLASHRR 480 481 VHTGEKPYKCNECGKAFSVHSNLTTHQVIHTGEKPYKCNQCGKGFSVHSSLTTHQVIHTG 540 541 EKPYKCNECGKSFSVRPNLTRHQIIHTGKKPYKCSDCGKSFSVRPNLFRHQIIHTKEKPY 600 601 KRN |
| Interface Residues: | 303, 304, 305, 306, 308, 309, 330, 331, 332, 333, 334, 337, 341, 359, 360, 361, 362, 365, 376, 387, 388, 389, 390, 393, 414, 415, 416, 417, 418, 420, 421, 422, 423, 424, 427, 442, 443, 444, 445, 446, 447, 448, 449, 450, 453, 470, 471, 472, 473, 474, 476, 477, 479, 498, 499, 500, 501, 502, 505, 509, 511, 525, 526, 527, 528, 529, 530, 532, 533, 537, 554, 555, 556, 557, 558, 560, 561, 583, 585, 586, 589 |
| 3D-footprint Homologues: | 2drp_D, 5k5i_A, 7w1m_H, 5und_A, 2gli_A, 5k5l_F, 8ssu_A, 5kkq_D, 8ssq_A, 5yel_A, 5v3j_F, 2i13_A, 6wmi_A, 1ubd_C, 2kmk_A, 7ysf_A, 8cuc_F, 7n5w_A, 3uk3_C, 6jnm_A, 1llm_D, 6blw_A, 6u9q_A, 1mey_C, 4m9v_C, 7eyi_G, 8h9h_G, 7y3m_I, 6e94_A, 6a57_A, 2jpa_A, 1tf6_A, 4x9j_A, 2wbs_A, 5ei9_F, 7txc_E, 5kl3_A, 1f2i_J, 5yj3_D, 2lt7_A, 7y3l_A, 1tf3_A, 1g2f_F, 6ml4_A, 8gn3_A |
| Binding Motifs: | ZNF415_ChIP gGrygmTgGAGCcrg |
| Related annotations: | PaperBLAST |
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