Transcription Factor

						

			
Accessions: 6ido_B (3D-footprint 20231221)

			
Names: DNA-directed RNA polymerase subunit beta, EC 2.7.7.6, RNA polymerase sigma factor RpoS,RNA polymerase beta-flap-tip-helix, RNAP subunit beta, RPOB_KLEP7, Transcriptase subunit beta
Organisms: Klebsiella pneumoniae subsp. pneumoniae, strain ATCC 700721 / MGH 78578
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 77
Pfam Domains:      6-59 Sigma-70, region 4
Sequence: 
(in bold interface residues)		   1 QSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREI   60
  61 LQGTQLTPEEKLLRAIF
Interface Residues: 32, 33, 42, 43, 44, 45, 47, 48
3D-footprint Homologues: 3n97_A, 6ido_B, 8cyf_B, 4pxi_B, 6wpa_A
Binding Motifs: 6ido_B CTtGAC
Binding Sites: 6ido_E
6ido_F
			
Publications: Lou YC, Chou CC, Yeh HH, Chien CY, Sadotra S, Hsu CH, Chen C. Structural basis for -35 element recognition by σ(4) chimera proteins and their interactions with PmrA response regulator. Proteins 88:69-81 (2020). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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