Transcription Factor

						

			
Accessions: T125955_1.02 (CISBP 1.02)

			
Names: estExt_fgenesh1_pg.C_Chr_16.00010090, T125955_1.02;
Organisms: Ostreococcus tauri
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Myb/SANT
Length: 369
Pfam Domains:    20-128 Response regulator receiver domain
  214-264 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MGTAPNRLFDSKNFPAGMGVMVVDDDLLCLKVVEKMLKACKYRVTACSTAESALAILRTR   60
  61 KDEFDIVLSDVHMPDVDGFKLLEIIQFELNLPVLMMSANSDSSVVLRGIIHGAVDYLLKP  120
 121 VRIEELRNIWQHVVRRDYSARNSGSEDGVNPSSPSKRLKTSGSDSKSEEVERAANEAGSS  180
 181 KARKKPAGKKGAKGSKEKEAERKGDAIDSSKKPRVVWSAELHTQFVTAVNQLGIDKAVPK  240
 241 RILDLMGIQGLTRENVASHLQKYRLYLKRLQGNDLMRNGSNASSSGGVSQSRAKEQPMTI  300
 301 KGKNVNPFLDDNIFRADDLGLPGDLGNIGYDASFDPSLLAPLDLDKVGKSDVLGADPSDN  360
 361 ILNFFFQGD
Interface Residues: 214, 253, 254, 257, 258, 261, 262
3D-footprint Homologues: 6qec_A, 7d3t_D, 8xas_E, 6j5b_C
Binding Motifs: M1397_1.02 smrdATct
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.