Transcription Factor

Accessions: 1vpw_A (3D-footprint 20231221)
Names: HTH-type transcriptional repressor PurR, Pur regulon repressor, Purine nucleotide synthesis repressor, PURINE REPRESSOR, PURR_ECOLI
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P0ACP7
Length: 338
Pfam Domains: 1-46 Bacterial regulatory proteins, lacI family
58-323 Periplasmic binding proteins and sugar binding domain of LacI family
60-306 Periplasmic binding protein domain
169-329 Periplasmic binding protein-like domain
Sequence:
(in bold interface residues)
1 TIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSMKVNHTKSI 60
61 GLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVM 120
121 CSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIG 180
181 VIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTA 240
241 VFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAF 300
301 NMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYR
Interface Residues: 2, 3, 12, 13, 14, 15, 17, 18, 24, 25, 26, 49, 52, 53
3D-footprint Homologues: 1efa_B, 3oqm_C, 7ce1_D, 1l1m_B, 1jft_A, 1zvv_A
Binding Motifs: 1vpw_A CGCanACG
Binding Sites: 1vpw_B
Publications: Arvidson D.N, Lu F, Faber C, Zalkin H, Brennan R.G. The structure of PurR mutant L54M shows an alternative route to DNA kinking. Nature structural biology 5:436-41 (1998). [Pubmed]
Related annotations: PaperBLAST

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