Transcription Factor

Accessions: 1yrn_A (3D-footprint 20231221)
Names: MAT A1 HOMEODOMAIN, MATa1 protein, MATA1_YEASX, Mating-type protein A1
Organisms: Saccharomyces cerevisiae
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P0CY10
Length: 49
Pfam Domains: 2-48 Homeobox domain
22-48 Homeobox KN domain
Sequence:
(in bold interface residues)
1 ISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRS
Interface Residues: 36, 39, 40, 43, 44, 47, 48
3D-footprint Homologues: 5jlw_D, 1le8_A, 7q3o_C, 4j19_B, 1ig7_A, 1e3o_C, 1au7_A, 4xrm_B, 3d1n_M, 1b72_A, 4cyc_A, 2r5y_A, 1puf_B, 6es3_K, 4xrs_G, 3l1p_A, 2hdd_A, 1nk2_P, 8g87_X, 1du0_A, 5zfz_A, 3a01_E, 1zq3_P, 6fqp_B, 5flv_I, 3lnq_A, 1o4x_A, 5zjt_E, 4qtr_D, 3cmy_A, 2h1k_B, 1jgg_B, 6fqq_E, 5hod_A, 3rkq_B, 2lkx_A, 1puf_A, 1fjl_B, 6a8r_A, 1ic8_B, 2hos_A, 2h8r_B
Binding Motifs: 1yrn_AB TGTAawTnnTtnCnTCA
Publications: Li T, Stark M.R, Johnson A.D, Wolberger C. Crystal structure of the MATa1/MAT alpha 2 homeodomain heterodimer bound to DNA. Science (New York, N.Y.) 270:262-9 (1995). [Pubmed]
Related annotations: PaperBLAST

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