Transcription Factor
| Accessions: | T110650_1.02 (CISBP 1.02) |
| Names: | Medtr3g103160.1, T110650_1.02; |
| Organisms: | Medicago truncatula |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:MADF |
| Length: | 464 |
| Pfam Domains: | 73-140 Myb/SANT-like DNA-binding domain 76-163 Myb/SANT-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MYLSSEKPRPIDFYKEEARDMMMEVVTNTDLQPPPPPPSQHHHHLQQQQPQMILTAESSG 60 61 DDPEMEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDR 120 121 SPTMCTDKWRNLLKEFKKAKHHDRGGGSGSGGKMSCYKEIDEILRERSKCGQYKNVVTPT 180 181 SKVESSYMQFDKGIDDANISFGPVEASGRPTLNLERSLDHDGHPLAIAAADVAASGVPPW 240 241 NWRETPGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRAFWLED 300 301 EEQIIRSIDRDMPIGNYTLHLDEGMAIKVCLYDESDHIPVHTEEKIFYTEDDYRDFLARR 360 361 AWTGLREFDGYRNIDNMDDLRPGAIYRGKLVDEGMQDVIQDRGEFALPTCCDGRGPKQQR 420 421 SRARHRENKALSVNMIVHNHHITSNYIKFLKKEVIILSDMSYLL |
| Interface Residues: | 103, 126, 127, 128, 210, 223, 226 |
| 3D-footprint Homologues: | 2h8r_B, 3hqg_A, 6qzk_A |
| Binding Motifs: | M1293_1.02 ytaACymsrs |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.